Pairwise Alignments

Query, 388 a.a., ABC transporter, substrate-binding protein (cluster 4, leucine/isoleucine/valine/benzoate) from Variovorax sp. SCN45

Subject, 382 a.a., Leucine-, isoleucine-, valine-, threonine-, and alanine-binding protein from Xanthobacter sp. DMC5

 Score = 92.8 bits (229), Expect = 1e-23
 Identities = 93/392 (23%), Positives = 170/392 (43%), Gaps = 26/392 (6%)

Query: 4   KTLTTLAVLGLIATLASAQQQQGVTKDEIRIGTIQDLSGPLAGFGKQARNGMQLRVDELN 63
           + +T    L L+AT A+          EI+IG +   +GP +  G      +++ V+ELN
Sbjct: 3   RIVTGAFALALLATAATTPALA-----EIKIGAVVSETGPASSLGDPEAKTIRMMVEELN 57

Query: 64  EQGSVNGRKLKLFVEDSGYDPKKAVLAAQKLVNQEKIFIMAGHIGTAQNMAAMPVQFDKN 123
            +G + G K KL + D G DP KA   A +LV  + +  M G   T  ++A + V  +++
Sbjct: 58  AKGGIRGEKAKLVLYDDGGDPSKAKTFATRLVEDDGVVAMVGGTTTGTSLAILAVA-EES 116

Query: 124 VINYMPITAAREMYEPLNRLKYSFAATYYDQIRLALPKMIKD---KGAKKVCTIYQDDEF 180
            + ++ +  A E+ +P+    ++F   + D  R+A  K+  D   +G  K+  I   D F
Sbjct: 117 KVPFISLAGAIEIIDPVK--PFTFKTPHTD--RMACQKIFDDMKARGLTKIGLISGTDGF 172

Query: 181 GLEVQRGAEAGLKAAGMELTEKTSFKRGATDFSSQVAKMKAANCDLVVLGTIIRETIGTV 240
           G  ++    A  K +G+E+    ++     D + Q+  ++  +    VL T   +   T+
Sbjct: 173 GASMRAQCIAVAKTSGIEIVADETYGPKDADMTPQLTNIRNKSGIQAVLNTGFGQGPATI 232

Query: 241 --GEARKTGFNPTFLGSSAAYTDLIHKLGGKAMDGIYATMT------VQNPYTDEQSQPL 292
               A+     P +     A    I   G K  +G+    T      + +P   +++  L
Sbjct: 233 TRNYAQLGITLPLYQSHGVASNAFIELSGAKNAEGVRLPGTALLVGELLDPKDPQKNVVL 292

Query: 293 RFWANKYKTKFNEDPTVFSVYGYVIIDSFIKAATKAGPNLTTDSFIKAMDSITFEPDMFG 352
            + A+  K       + F  Y +  +    +A  KA P+    +   A++  T      G
Sbjct: 293 AYKASFEKAAGGAPVSTFGGYAHDAMRILTEALAKA-PSAKPTAIRDAIEGTTGLVGTTG 351

Query: 353 SPKSTYTATKRLGNDQS--RLSQIKDGKWVVV 382
           +    Y+ T  LG D S  R+ +I +G W +V
Sbjct: 352 T--YNYSKTDHLGLDLSAFRMLEISNGGWKLV 381