Pairwise Alignments

Query, 388 a.a., ABC transporter, substrate-binding protein (cluster 4, leucine/isoleucine/valine/benzoate) from Variovorax sp. SCN45

Subject, 376 a.a., Leu/Ile/Val/Thr-binding protein from Xanthobacter sp. DMC5

 Score =  112 bits (281), Expect = 1e-29
 Identities = 88/331 (26%), Positives = 153/331 (46%), Gaps = 18/331 (5%)

Query: 6   LTTLAVLGLIATLASAQQQQGVTKDEIRIGTIQDLSGPLAG-FGKQARNGMQLRVDELNE 64
           LT L +     +LASA         ++++G +Q  SG  A  +G   +NG +L   E+N 
Sbjct: 6   LTRLLIAATAVSLASAPAFAA----DVKLGIVQSTSGGSAALYGTMQKNGAELAAAEINA 61

Query: 65  QGSVNGRKLKLFVEDSGYDPKKAVLAAQKLVNQEKIFIMAGHIGTAQNMAAMPVQFDKNV 124
            G +   KL    +D   D  + V   Q+L+NQ+K+ ++ G   T    AA P+     V
Sbjct: 62  SGKLGDLKLVPVHQDDAGDRGQTVNIFQRLINQDKVTVIFGPTLTTSAFAADPIANAAKV 121

Query: 125 INYMPITAAREMYEPLNRL-KYSFAATYYDQIRL--ALPKMIKDKGAKKVCTIYQDDEFG 181
               P+ A+      +  + +Y F  +  +       L   +K    K    IY  D+  
Sbjct: 122 ----PVIASSNTAPGVPAIGEYIFRTSAPEAAVFPGVLAYAVKRYQPKTAAQIYGIDDVL 177

Query: 182 LEVQRGA-EAGLKAAGMELTEKTSFKRGATDFSSQVAKMKAANCDLVVLGTIIRETIGTV 240
           ++   G  +A L  AG+++    +F++G  D+S+Q+ K+KAAN D++V+G +  ET   V
Sbjct: 178 MKAAYGVHKAALDKAGIKVVATETFQKGDVDYSAQLTKIKAANPDIIVVGGLAEETANIV 237

Query: 241 GEARKTGF--NPTFLGSSAAYTDLIHKLGGKAMDGIYATMTVQNPYTDEQSQPLRFWANK 298
            +AR+ G   +  FLG++AA +  ++ L G A  G    +     + D  +   + +   
Sbjct: 238 RQARQLGIPQSTVFLGANAAISTKLNDLAGPAAQGF---LVGSGWFIDFDTPANKAFVEA 294

Query: 299 YKTKFNEDPTVFSVYGYVIIDSFIKAATKAG 329
           YK K+   P  F+   +  +  F  A  +AG
Sbjct: 295 YKAKYGNAPDTFAAQAHAAVTIFADAVKRAG 325