Pairwise Alignments

Query, 291 a.a., ABC transporter, permease protein 1 (cluster 4, leucine/isoleucine/valine/benzoate) from Variovorax sp. SCN45

Subject, 297 a.a., High-affinity branched-chain amino acid transport system permease protein LivH from Xanthobacter sp. DMC5

 Score =  193 bits (491), Expect = 3e-54
 Identities = 97/289 (33%), Positives = 189/289 (65%), Gaps = 7/289 (2%)

Query: 3   ILQLLLSGIAQGCIYGLIALGFVLIYKATETVSFAQGDLMMLGAFGAFAGMSLFGMPFWL 62
           +LQL+++G+  G +YG++ + FVLIYKA++ V+FAQG+ +++GA+  +  ++ + +PF+ 
Sbjct: 6   LLQLIINGLIIGTLYGVVGMCFVLIYKASQVVNFAQGEFLLIGAWTCWWLLTAWNIPFFW 65

Query: 63  AAILAVVAMAAFGVLLELVVIRSILGQPQFSIVMLTIGIAYVARGVITMVPGIGTETHTL 122
             ++AV  M  FG+ ++++V+R ++G+P  S++M+TIG++   + ++  + G   +    
Sbjct: 66  GFLIAVCFMMVFGIAVQMIVLRPLIGEPIISVIMVTIGLSIFFQALMKWMFGTFAQPFPP 125

Query: 123 AVPYKDQIWKLGELVVNLEQLAIIIATAVLCGLLFAMFRYSKLGIAMQASSQNQLAAYYM 182
             P   Q+  LG  V     ++  ++ A++ G  +  F+YS+LG+AM+A++ +Q  A  +
Sbjct: 126 IFPVA-QVNILGLQVQTAYLMSTGVSLAIMAGFAW-FFKYSRLGLAMRATAFSQQVAQSL 183

Query: 183 GIPVKRLNGLVWGLAAAVAAIAGMLLAPITFVHANMGFIGLKAFPAAVVGGFGSLPGAIV 242
           GI V+++  L WG++AAV+A+AG+++  +  V + + + G+K FPA ++GG  S+ GA+V
Sbjct: 184 GISVRQVFALSWGISAAVSAVAGVVVGIVNGVSSALSYFGIKVFPAVILGGLDSVFGAVV 243

Query: 243 GGLVIGIVESFAGF----YLPDG-FKDTAPYIVVLLMLMIKPNGLFGEK 286
           GGL++G++E+   +    YL  G   +  P+  ++++LMIKP GLFG +
Sbjct: 244 GGLIVGLLENLGQYVDSQYLKWGNLYEIIPFYALIIILMIKPYGLFGTR 292