Pairwise Alignments

Query, 291 a.a., ABC transporter, permease protein 1 (cluster 4, leucine/isoleucine/valine/benzoate) from Variovorax sp. SCN45

Subject, 290 a.a., High-affinity branched-chain amino acid transport system permease protein LivH from Xanthobacter sp. DMC5

 Score =  146 bits (368), Expect = 6e-40
 Identities = 81/283 (28%), Positives = 154/283 (54%), Gaps = 3/283 (1%)

Query: 3   ILQLLLSGIAQGCIYGLIALGFVLIYKATETVSFAQGDLMMLGAFGAFAGMSLFGMPFWL 62
           ++QL+L+GI  G +Y +I++G  LI+     V+FA G+ +M+G + A+   + FG+  + 
Sbjct: 4   LIQLVLNGILLGSMYAIISVGLTLIFGIVRVVNFAHGEFLMVGMYAAYLLAAKFGLHPYA 63

Query: 63  AAILAVVAMAAFGVLLELVVIRSILGQPQFSIVMLTIGIAYVARGVITMVPGIGTETHTL 122
           AA+  V+ + A G  ++  +I+ +LG  +   +  T+G++     +  +V   G + +++
Sbjct: 64  AAVPIVILLFAIGAAVQRFLIQPLLGAEEHIQIFATVGLSTALVNLALLV--FGADLYSI 121

Query: 123 AVPYKDQIWKLGELVVNLEQLAIIIATAVLCGLLFAMFRYSKLGIAMQASSQNQLAAYYM 182
                     +G   +   QL + +    L   L    + + LG A++A++QN+ AA  M
Sbjct: 122 PPSAAQGTVMVGGFSLVKGQLVMFVCALALVAGLHLFMQSTALGRAIRATAQNRTAALLM 181

Query: 183 GIPVKRLNGLVWGLAAAVAAIAGMLLAPITFVHANMG-FIGLKAFPAAVVGGFGSLPGAI 241
           G+ V ++  + +G+ AA   +A  L+ P+  V   +G +  L AF   V+GG  S+ GA 
Sbjct: 182 GVKVDQIYVIAFGIGAACVGLASALVMPLYPVTPTIGTYFVLTAFVVVVLGGMRSMYGAF 241

Query: 242 VGGLVIGIVESFAGFYLPDGFKDTAPYIVVLLMLMIKPNGLFG 284
            G ++IG+V+S +G+Y+    K+   + + L +L+ KP GLFG
Sbjct: 242 FGAMIIGLVDSLSGYYIAPDLKEVVYFAIFLAILIFKPTGLFG 284