Pairwise Alignments

Query, 291 a.a., ABC transporter, permease protein 1 (cluster 4, leucine/isoleucine/valine/benzoate) from Variovorax sp. SCN45

Subject, 290 a.a., High-affinity branched-chain amino acid transport system permease protein LivH (TC 3.A.1.4.1) from Variovorax sp. SCN45

 Score =  190 bits (482), Expect = 4e-53
 Identities = 108/285 (37%), Positives = 162/285 (56%), Gaps = 2/285 (0%)

Query: 2   QILQLLLSGIAQGCIYGLIALGFVLIYKATETVSFAQGDLMMLGAFGAFAGMSLFGMPFW 61
           + L+  L G+  G +  LIAL FVLIYK T  V+FA G++MMLGA+  +AG   FG+P W
Sbjct: 3   EFLEYSLLGLLSGGVMALIALSFVLIYKGTGVVNFAVGEVMMLGAYIYYAGAVTFGLPPW 62

Query: 62  LAAILAVVAMAAFGVLLELVVIRSILGQPQFSIVMLTIGIAYVARGVITMVPGIGTETHT 121
           +A  LA+  +    + +E  V+R + GQP  +++M TIG+A +  G +  V G  T +  
Sbjct: 63  VAFALALAVIGVLAIAIERAVLRPLSGQPAVAVLMATIGMASIVHGGVEAVWGGDTLSPP 122

Query: 122 LAVPYKDQIWKLGELVVNLEQLAIIIATAVLCGLLFAMFRYSKLGIAMQASSQNQLAAYY 181
             +P    +  LGE+++    L      AVL G   A FRYSK GIA++A++ + + A  
Sbjct: 123 TLLPRTPLL--LGEVLIPGTVLGNFAVAAVLIGGFLAFFRYSKTGIALRATASDPVTAAT 180

Query: 182 MGIPVKRLNGLVWGLAAAVAAIAGMLLAPITFVHANMGFIGLKAFPAAVVGGFGSLPGAI 241
           +GI +     L W L+  V   AG+L+A    +   +    L  F A ++GG  S+ GAI
Sbjct: 181 LGININYAQRLTWLLSGLVGTFAGVLIASSAGLSPLLASAALSVFAAIILGGLDSILGAI 240

Query: 242 VGGLVIGIVESFAGFYLPDGFKDTAPYIVVLLMLMIKPNGLFGEK 286
           V  L+IG VES +  YL    +D  PY+VVL +L++KP G+FG +
Sbjct: 241 VASLLIGWVESVSAGYLGGKSRDVVPYVVVLAILVVKPYGMFGTR 285