Pairwise Alignments

Query, 291 a.a., ABC transporter, permease protein 1 (cluster 4, leucine/isoleucine/valine/benzoate) from Variovorax sp. SCN45

Subject, 293 a.a., putative Branched-chain amino acid ABC transporter, permease protein from Pseudomonas putida KT2440

 Score =  186 bits (471), Expect = 7e-52
 Identities = 100/291 (34%), Positives = 170/291 (58%), Gaps = 7/291 (2%)

Query: 5   QLLLSGIAQGCIYGLIALGFVLIYKATETVSFAQGDLMMLGAFGAFAGMSLFGMPFWLAA 64
           ++L+ G+  G +Y L+A+GFVLIYKA+   +FAQG +++  A   F  +   G+PFWL+ 
Sbjct: 6   EVLIGGLLAGVMYSLVAIGFVLIYKASGVFNFAQGAMVLFAAL-TFVSLLERGVPFWLSF 64

Query: 65  ILAVVAMAAFGVLLELVVIRSILGQPQFSIVMLTIGIAYVARGVITMVPGIGTETHTLAV 124
           ++ +  M A  +L+E  V+R ++G+   ++ M T+G+AY+  G    +   G + H L +
Sbjct: 65  LVTLATMIALALLIERAVLRPLVGRSPITLFMATLGLAYIIEGAAQAL--WGAQVHGLEL 122

Query: 125 PYKDQIWKLGELVVNLEQLAIIIATAVLCGLLFAMFRYSKLGIAMQASSQNQLAAYYMGI 184
              D   +LG L+++   L      A L  LL  +F  +++G+A++A + +  AA  +GI
Sbjct: 123 AISDAPLELGGLLLSQFDLFAAATAAALVVLLSLLFNRTRIGLALRAVADDPRAAMSVGI 182

Query: 185 PVKRLNGLVWGLAAAVAAIAGMLLAPITFVHANMGFIGLKAFPAAVVGGFGSLPGAIVGG 244
            + R+  +VW +A  V  +AG+L      V  ++  + LKA P  ++GGF S+ GAIVGG
Sbjct: 183 RLPRVWAVVWAVAGFVGLVAGLLWGARLGVQFSLSLVVLKALPVLIIGGFTSISGAIVGG 242

Query: 245 LVIGIVESFAGFY----LPDGFKDTAPYIVVLLMLMIKPNGLFGEKLRKKV 291
           L+IG  E  A  Y    +  G ++  PY++ LL L+++P GLFGE+  ++V
Sbjct: 243 LIIGASEKLAEVYFGPLIGGGIENWFPYVLALLFLLVRPAGLFGERAIERV 293