Pairwise Alignments

Query, 291 a.a., ABC transporter, permease protein 1 (cluster 4, leucine/isoleucine/valine/benzoate) from Variovorax sp. SCN45

Subject, 293 a.a., putative Branched-chain amino acid ABC transporter, permease protein from Pseudomonas putida KT2440

 Score =  172 bits (437), Expect = 6e-48
 Identities = 95/292 (32%), Positives = 169/292 (57%), Gaps = 7/292 (2%)

Query: 4   LQLLLSGIAQGCIYGLIALGFVLIYKATETVSFAQGDLMMLGAFGAFAGMSLFGMPFWLA 63
           L+ L+ G+  G +Y L+A+GFVLIYKA+   +FAQG +++  A   F  +   G+PF LA
Sbjct: 5   LETLIGGLLAGTLYSLVAIGFVLIYKASGVFNFAQGAMLLFAAL-TFVSLHEQGLPFALA 63

Query: 64  AILAVVAMAAFGVLLELVVIRSILGQPQFSIVMLTIGIAYVARGVITMVPGIGTETHTLA 123
             L V+ M    +L+E +V+R ++ + Q ++ M T+G++++  G+   +  +G +   L 
Sbjct: 64  LALTVLVMIVGALLIERLVLRPLVNRSQITLFMATLGLSFIIEGLAQGL--MGAQVRALD 121

Query: 124 VPYKDQIWKLGELVVNLEQLAIIIATAVLCGLLFAMFRYSKLGIAMQASSQNQLAAYYMG 183
           +  +D    +GEL+++   L     +A+L  +L  +F  +++G+A++A + +  AA  +G
Sbjct: 122 LGIEDVPLFVGELMISQFDLVASGVSALLVAVLALLFNKTRIGVALRAVADDTRAALSLG 181

Query: 184 IPVKRLNGLVWGLAAAVAAIAGMLLAPITFVHANMGFIGLKAFPAAVVGGFGSLPGAIVG 243
           I + R+  +VW +A  V  +AG+L      V  ++  + LKA P  ++GGF S+ GAIVG
Sbjct: 182 INLNRIWQIVWAVAGMVGLVAGLLWGARQGVQFSLSLVVLKALPVLIIGGFTSIGGAIVG 241

Query: 244 GLVIGIVESFAGFY----LPDGFKDTAPYIVVLLMLMIKPNGLFGEKLRKKV 291
           GL++G  E+ A  Y    +  G      Y + L+ L I+P GLFG++  ++V
Sbjct: 242 GLIVGAAENLAEAYIGPLIGGGITPWFAYFLALIFLYIRPAGLFGDRAIERV 293