Pairwise Alignments

Query, 291 a.a., ABC transporter, permease protein 1 (cluster 4, leucine/isoleucine/valine/benzoate) from Variovorax sp. SCN45

Subject, 300 a.a., ABC transporter, membrane spanning protein from Agrobacterium fabrum C58

 Score =  152 bits (385), Expect = 7e-42
 Identities = 100/299 (33%), Positives = 166/299 (55%), Gaps = 14/299 (4%)

Query: 4   LQLLLSGIAQGCIYGLIALGFVLIYKATETVSFAQGDLMMLGAFGAFA----GMSLF-GM 58
           +Q L++G+  G IYGLIA+G+ ++Y     ++FA GD+ MLG F A        S F G+
Sbjct: 5   IQQLINGLTLGSIYGLIAIGYTMVYGIIGMINFAHGDIFMLGGFAALIVFLIATSFFAGI 64

Query: 59  PFWLAAILA-VVAMAAFGV---LLELVVIRSILGQPQFSIVMLTIGIAYVARGVITMVPG 114
           P  L  +L  +VAM   G+   ++E V  R + G  + + ++  IG++      I +  G
Sbjct: 65  PVALLLLLMMIVAMLMTGLWNWVIERVAYRPLRGSFRLAPLITAIGMSIALSNFIQVTQG 124

Query: 115 IGTETHTLAVPYKDQIWKLGELVVNLEQLAIIIATAVLCGLLFAMFRYSKLGIAMQASSQ 174
              +     V    + +  G + V+L+QL I++ T+VL    + +   + LG A +A+ Q
Sbjct: 125 PRNKPIPSMVT---ESYHFGAITVSLKQLIIMVVTSVLLFAFWYIVNKTPLGRAQRATEQ 181

Query: 175 NQLAAYYMGIPVKRLNGLVWGLAAAVAAIAG-MLLAPITFVHANMGFI-GLKAFPAAVVG 232
           ++  A  +G+ V +   + + + AA+AA+AG M L        + GF+ G+KAF AAV+G
Sbjct: 182 DRKMAALLGVDVDKTISITFIMGAALAAVAGTMYLMYYGVASFSDGFVPGVKAFTAAVLG 241

Query: 233 GFGSLPGAIVGGLVIGIVESFAGFYLPDGFKDTAPYIVVLLMLMIKPNGLFGEKLRKKV 291
           G GSLPGA++GGL+IG++ES    Y    +KD A + ++  +L+ KP G+ G    +KV
Sbjct: 242 GIGSLPGAVLGGLLIGLIESLWSAYFSIAYKDVAAFGILAFVLIFKPTGILGRPEVEKV 300