Pairwise Alignments

Query, 385 a.a., Putative transporter from Variovorax sp. SCN45

Subject, 399 a.a., Inner membrane transport protein YdhP from Alteromonas macleodii MIT1002

 Score =  160 bits (405), Expect = 6e-44
 Identities = 105/374 (28%), Positives = 186/374 (49%), Gaps = 8/374 (2%)

Query: 9   ALWALLAGNFVIGTGVMVVPGTLNEISASLAVSVATAGQLITAAAAVMCIGAPLLAAAVA 68
           AL+AL    F IGT   V+ G +  I+  L V++ +AG L++  A  + +GAP+L A   
Sbjct: 4   ALFALTLSAFAIGTTEFVIVGLVPTIATDLGVTLPSAGLLVSLYAVGVAVGAPVLTALTG 63

Query: 69  GWDRRQLLALTLLWYAVGHALAALMPSFGALLPVRMLTVIAPAIFTPQAAACAGMLVPPE 128
            W+R+ +L   +  +  G+ LA   PS+ +L+  R+LT +A  +F    +  A  LV  E
Sbjct: 64  KWNRKHVLLSLMALFVAGNILAWQAPSYESLILARILTGLAHGVFFSIGSTIATGLVAKE 123

Query: 129 QRGRAVTFVFLGWSMASVLGLPIGALIGGHLGWRMAFGAIALLSVVSAASIWFTLPNGIR 188
           +   A+  +F G ++A V G+P+G  IG + GWR  F  ++ L  ++       +PN ++
Sbjct: 124 KEASAIAIMFTGLTVALVTGVPLGTWIGQNFGWRATFLVVSALGTLALIGSALLVPNNLK 183

Query: 189 PA-ALTAAAWSRVLRSPVLMGIVSVTALQGTGQFVLFSYFGPILKQSFGADATTLSVMWA 247
            +   T +   +VL  P L+ +  +T L   G F  F+Y   IL++  G   + +S+   
Sbjct: 184 QSKPATLSEQMKVLVQPRLVLVYLMTILGYGGTFTAFTYLALILQEEAGFAPSAISLTML 243

Query: 248 LFGACGLIGNMVVSRFIDRVG--AGRMVLITTVLIALSLLLWPTASTLAWLAVVLVPWGL 305
           ++G    +GN+   +  D+ G  +   ++ + + + L  L +   S +A +  VLV WG 
Sbjct: 244 VYGVSVAVGNIYGGKLADKKGPISALTIIFSALAVILFALTFTMGSKVAAVITVLV-WGA 302

Query: 306 GCFATNSAQQARLVGLAPALAPGSV----ALNSSGIYTGQAVGAALGGWLLAHDAAAWMS 361
             F      Q  +V LA    P +V     LN +    G AVG+ LGG ++     +  +
Sbjct: 303 FAFGNVPGLQVYVVQLAEKFTPNAVDVASGLNIAAFNIGIAVGSILGGAIVDGMQLSDTA 362

Query: 362 WVGFGVMLVAIALS 375
           W+G  + + A+ ++
Sbjct: 363 WIGAIISVAALLVT 376