Pairwise Alignments

Query, 209 a.a., TRAP-type C4-dicarboxylate transport system, small permease component from Variovorax sp. SCN45

Subject, 187 a.a., C4-dicarboxylate ABC transporter substrate-binding protein from Magnetospirillum magneticum AMB-1

 Score = 90.1 bits (222), Expect = 2e-23
 Identities = 49/150 (32%), Positives = 80/150 (53%), Gaps = 2/150 (1%)

Query: 8   VDRFSTWIGKTFAWCALLLTLLISWEVFSRYAL-NKPHAWVLDAQIMLYGAMFMTAGAYT 66
           +DR + W+G++  W  LL+ ++ S     RY   N  +AW L+ Q  L+ A+F+    YT
Sbjct: 11  IDRINEWVGRSVYWLILLMVIVSSGNATIRYIFSNSSNAW-LEVQWYLFAAVFLLCAGYT 69

Query: 67  LSKNGHVRGDVLYGFFRPRTQAMVDLTLYIVFFLPGIVALTWAGWIYAGESLAIREQTFS 126
           L KN H+R DV+ G    RTQ  +D+   +VF  P  + +    W    +S  + E +  
Sbjct: 70  LLKNEHIRIDVIAGRLPRRTQIWIDILGTLVFLFPMALLILTLSWPMFMKSFTMMEMSSD 129

Query: 127 AEPLPLYPFKYVIPLAGFTLLLQGIVEIIR 156
           A  L  +P K ++P+    L+LQG+ E+I+
Sbjct: 130 AGGLIRWPVKLLLPVGFSLLMLQGVSELIK 159