Pairwise Alignments

Query, 342 a.a., KEGG: putative spermidine/putrescine transport system ATP-binding protein from Variovorax sp. SCN45

Subject, 348 a.a., putative ATP-binding component of a transport system (VIMSS) from Escherichia coli BW25113

 Score =  234 bits (597), Expect = 2e-66
 Identities = 130/275 (47%), Positives = 184/275 (66%), Gaps = 3/275 (1%)

Query: 5   LDNVNYNYPGSTHGLHDVSLDVRTGELVAVIGPSGSGKSTLLKLVSGLETGHTGRIALDG 64
           L NV   + GS   + +++L +  G++V ++GPSG GK+T+L+LV+GLE    G+I +DG
Sbjct: 9   LRNVTKRF-GSNTVIDNINLTIPQGQMVTLLGPSGCGKTTILRLVAGLEKPSEGQIFIDG 67

Query: 65  EDMSRTPVHQRNIGMVFQSYALFPHLSVLDNVAYGLKLRKVGTAERRQRAQELLDIVGLG 124
           ED++   + QR+I MVFQSYALFPH+S+ +NV YGLK+  V  AE + R +E L +V L 
Sbjct: 68  EDVTHRSIQQRDICMVFQSYALFPHMSLGENVGYGLKMLGVPRAELKARVKEALAMVDLE 127

Query: 125 DFSARAVAQLSGGQQQRVALARALAIDPRALLLDEPLSALDASVRGHLRDQIRSIQQRFN 184
            F  R V Q+SGGQQQRVALARAL + P+ LL DEPLS LDA++R  +RD+IR +Q++F+
Sbjct: 128 GFEDRFVDQISGGQQQRVALARALILKPKVLLFDEPLSNLDANLRRSMRDKIRELQKQFD 187

Query: 185 ATTLLVTHDQEEALVMADRVAMLKDGRLLQIATPRDIYENPASRAVAEFVGLSTILPAKV 244
            T+L VTHDQ EA  ++D V ++  G ++QI +P+D+Y  PASR +A F+G + + PA  
Sbjct: 188 ITSLYVTHDQSEAFAVSDTVLVMNKGHIMQIGSPQDLYRQPASRFMASFMGDANLFPATF 247

Query: 245 SGADLLDLGFAELAAPTGRRAFGAEVHVLVRPEHI 279
           S    +D+    L  P      G E  V VRPE I
Sbjct: 248 SDG-YVDIYGYHLPRPLHFGTQG-EGMVGVRPEAI 280