Pairwise Alignments

Query, 314 a.a., Efflux ABC transporter, ATP-binding protein from Variovorax sp. SCN45

Subject, 906 a.a., ribosome-associated ATPase from Pseudomonas putida KT2440

 Score =  154 bits (388), Expect = 1e-41
 Identities = 92/242 (38%), Positives = 141/242 (58%), Gaps = 4/242 (1%)

Query: 1   VPPTTAPTPPL-FHVSRLRKRYGETTVVDDLSFEIAPGECLGVIGPNGAGKTTTIRMCLG 59
           +PP  A   P+      L  R+G+ T V+ +SF I  GE  G +G NG GKTTT+++  G
Sbjct: 257 IPPRQATDGPVAIEAHDLTLRFGDFTAVNKVSFAIGRGEIFGFLGSNGCGKTTTMKVLTG 316

Query: 60  LTAPDGGEISALGLQMPRDALAIKAQLGVVSQFDTLDPDFSCAENLVVYGRYFGFGKAQV 119
           L     G  S LG  +    LA + ++G +SQ  +L  + S  +NL ++ R F   KA+ 
Sbjct: 317 LMPASEGSASLLGRPVDASDLATRKRVGFMSQSFSLYGELSTRQNLALHARLFDLPKAES 376

Query: 120 RARVPQLLEFAALSHKADAKPGELSGGMRRRLSLARALVNDPKLLLLDEPTTGLDPQARH 179
             R+ +L+E   L+  AD   G L  G+R+RLSLA A+++ P++L+LDEPT+G+DP AR 
Sbjct: 377 AQRIDELIERFDLAAIADQPSGALPLGLRQRLSLAVAVLHRPEVLILDEPTSGVDPAARD 436

Query: 180 LMWERL-QVLLQQGKSILLTTHFMDEAERLCSRLLVLDHGRKIAEGRPRDLIAEHLEPDV 238
             W  L ++  +QG +I L+THFM+EA+R C R+ ++  GR +A   P D +    + D 
Sbjct: 437 DFWRLLVELSREQGVTIFLSTHFMNEAQR-CDRISLMHAGRVLACDTP-DALQHQYQGDT 494

Query: 239 VE 240
           +E
Sbjct: 495 LE 496



 Score =  133 bits (334), Expect = 2e-35
 Identities = 78/228 (34%), Positives = 126/228 (55%), Gaps = 7/228 (3%)

Query: 10  PLFHVSRLRKRYGETTVVDDLSFEIAPGECLGVIGPNGAGKTTTIRMCLGLTAPDGGEIS 69
           P      +  RYG+   +  L F +  G    +IGP+GAGK+T + +  G+     GE+ 
Sbjct: 4   PALLAEGISHRYGDLIALHPLGFSLPVGTRCALIGPDGAGKSTLLGLIAGVKRLQQGELQ 63

Query: 70  ALG--LQMPRDALAIKAQLGVVSQF--DTLDPDFSCAENLVVYGRYFGFGKAQVRARVPQ 125
            LG  ++  R   A+  ++  + Q   + L P+ S +EN+  +   FG G+ +   R+  
Sbjct: 64  VLGGSIRQRRHRTALYPKVAFMPQGLGNNLYPELSISENIRFFATLFGLGRRECEQRMAN 123

Query: 126 LLEFAALSHKADAKPGELSGGMRRRLSLARALVNDPKLLLLDEPTTGLDPQARHLMWERL 185
           LL+   L H A    G+LSGGM+++L L  AL+++P LL+LDEPTTG+DP +R   WE +
Sbjct: 124 LLQATDLQHFAQRPAGKLSGGMKQKLGLCCALIHEPDLLILDEPTTGVDPLSRRRFWELV 183

Query: 186 QVLLQQGK--SILLTTHFMDEAERLCSRLLVLDHGRKIAEGRPRDLIA 231
           + +  Q    ++L+ T +M+EAE+     L+LD GR +A G   +L A
Sbjct: 184 EQVRAQRPQLTLLVATAYMEEAEQF-EHCLMLDGGRLLAAGPSHELAA 230