Pairwise Alignments

Query, 275 a.a., Efflux ABC transporter, permease protein from Variovorax sp. SCN45

Subject, 263 a.a., ABC transporter from Pseudomonas putida KT2440

 Score = 56.6 bits (135), Expect = 5e-13
 Identities = 46/205 (22%), Positives = 95/205 (46%), Gaps = 20/205 (9%)

Query: 44  LIGNIAEPLIWLVAFGYGMGALVGQVSVD--DVKVPYILFLASGSICMSAMNAASFEALY 101
           L+  +  PL+WL+ F  G  A +G   ++  D  +PY +++  G  CM  +    F  + 
Sbjct: 26  LLSALVRPLLWLLVFAAGFRAALGIAIIEPYDTYIPYEVYIIPGLACMILL----FNGMQ 81

Query: 102 SAFSRMHVQK--TWDGIMNAPVGLDDIVLAEMLWAAFKSIFTVTAILFVMLGLGIS-HSP 158
            + S ++ ++  +   ++ +P+    ++ +++L  +  S+  V A L +    G+   + 
Sbjct: 82  GSLSMVYDREMGSMRVLLTSPLPRPFLLGSKLLATSLISLLQVYAFLAIAWLYGVQPPAA 141

Query: 159 KLVVAWMVLVGAGITFSSVALIFNALAKGYDFFTYYFTLFMTPMMFLSGVFFPLEQLPAA 218
            L++A   L+      S++ L+ +   +  + F       + P+ FLS   +PL ++   
Sbjct: 142 GLLMALPALLLVAFMLSALGLLLSNAIRQLENFAGVMNFVIFPLFFLSSALYPLWKM--- 198

Query: 219 VRAVAAWL-------PLTNAVALVR 236
            R  + WL       P T+AV LVR
Sbjct: 199 -REASQWLYWLCAVNPFTHAVELVR 222