Pairwise Alignments

Query, 275 a.a., Efflux ABC transporter, permease protein from Variovorax sp. SCN45

Subject, 259 a.a., putative ABC transporter - permease subunit from Pseudomonas putida KT2440

 Score = 53.9 bits (128), Expect = 3e-12
 Identities = 48/205 (23%), Positives = 90/205 (43%), Gaps = 15/205 (7%)

Query: 31  RNLLVWRKLAIPSLIGNIAEPLIWLVAFGYGMGALVGQVSVDDVKVPYILFLASGSICMS 90
           R L +W +  +P        P I +V +    G L+G+   D     Y+ ++  G I MS
Sbjct: 22  RFLRIWPQTLLP--------PAITMVLYFVIFGNLIGRQIGDMGGFTYMQYIVPGLIMMS 73

Query: 91  AMNAASFEALYSAFSRMHVQKTWDGIMNAPVGLDDIVLAEMLWAAFKSIFT---VTAILF 147
            +   S+  + S+F     Q++ + +M +PV    I++  +L    + +     VT +  
Sbjct: 74  VITN-SYGNVVSSFFGSKFQRSIEELMVSPVSPHTILVGYVLGGVLRGLAVGVIVTILSM 132

Query: 148 VMLGLGISHSPKLVVAWMVLVGAGITFSSVALIFNALAKGYDFFTYYFTLFMTPMMFLSG 207
               L + H   L V   V++     FS +  +    A+ +D  +   T  +TP+ +L G
Sbjct: 133 FFTDLQVHH---LGVTVAVVLLTATIFSLLGFVNAVFARNFDDISIIPTFVLTPLTYLGG 189

Query: 208 VFFPLEQLPAAVRAVAAWLPLTNAV 232
           VF+ +  LP   + V+   P+ + V
Sbjct: 190 VFYSINLLPPFWQTVSLANPVLHMV 214