Pairwise Alignments

Query, 277 a.a., Pseudouridine synthase from Variovorax sp. SCN45

Subject, 236 a.a., S4 domain protein from Pseudomonas putida KT2440

 Score =  124 bits (312), Expect = 1e-33
 Identities = 84/269 (31%), Positives = 133/269 (49%), Gaps = 34/269 (12%)

Query: 9   SDAVRLNKRMAELKMCSRREADEWIANGWVKVNGRPAEMGVKVTPSDRIEIDKAAKGQQA 68
           S+ VRL+KR+ E   CSRREA+++I  GWV V+G   E         R+E+   A+ +  
Sbjct: 2   SEPVRLSKRLIEQLGCSRREAEQYIEGGWVTVDGVVVEQPQFKVEQQRVELLPGARAETL 61

Query: 69  NQVTILINKPIGYVSGQAEDGHDPAVVLFTPQNRWAEDNARFFFSPQQLRGLAPCGRLDI 128
             VT+L+N+P G  S  A    +   +  +  +R         F+ Q    +AP   L+ 
Sbjct: 62  EPVTLLLNQPAGMDSEDARASMNMGSL--SEAHREGVRALHGHFARQAC--VAP---LER 114

Query: 129 DSIGLLVMTQDGRIARQLIGEDSVMEKEYLVRVAYHGLGQPAPTGQLVRMDDDDPVTTNV 188
            + GL V TQD R++R++  +   +E+E+++ V     G+  P                 
Sbjct: 115 GASGLQVFTQDWRVSRKIEADLRRLEQEFIIEVR----GETTPQA--------------- 155

Query: 189 QAVFPPAMLARLRHGLSLDGQALKPARVEWQNPEQLRFVLTEGKKRQIRRMCELVGLKVV 248
                   L RL  G   + + L  A+  WQN   LR VL   +  QI  +C  + L+++
Sbjct: 156 --------LERLARGAMRNDRELPKAKASWQNETHLRMVLKNPQPGQISELCAYLRLELL 207

Query: 249 GLKRVRIGKVMLGNLPVGQWRYLAPHEKF 277
           G++R+R+G V +G LP+GQWRYLA  E+F
Sbjct: 208 GMRRIRLGGVSMGKLPLGQWRYLATSERF 236