Pairwise Alignments

Query, 369 a.a., Multidrug efflux system, membrane fusion component => MexH of MexHI-OpmD system from Variovorax sp. SCN45

Subject, 416 a.a., efflux RND transporter periplasmic adaptor subunit from Rhodanobacter sp000427505 FW510-R12

 Score =  146 bits (369), Expect = 9e-40
 Identities = 120/388 (30%), Positives = 181/388 (46%), Gaps = 44/388 (11%)

Query: 5   SRVWLGASL--ATLVLGGAGFGLAMKLRPAHAEG--------GGM------PPAKVAVAT 48
           SR W  A +  A +V+   GF L  K  PA A          GG       PP  V V  
Sbjct: 2   SRFWKIALIVVAVVVVAAVGFRLLHKPAPAGAASTQAASKNKGGKDGKDETPPVPVTVVP 61

Query: 49  AQKTQVARFLSGIGTLEANRQVEVPAEVEGRVAKILFTPGGEVRAGQLLVQLNDAPEQGD 108
             K  V  +L+ +GT++A   V V  +V G++  + F+ G  V+ GQLL Q++    Q  
Sbjct: 62  VVKQNVPVYLTALGTVQALNTVTVNPQVGGQLLSLHFSEGQPVKKGQLLAQIDPRIYQAA 121

Query: 109 MERLTAQR-------ANAKALLERTRRLLPQQAATQEQLE-------QAQAAFDQASGDL 154
            ++  A++       A AK+ L R+R L  +   +++ L+       Q +AA    + ++
Sbjct: 122 YDQAVARQRQDQALAATAKSNLTRSRDLAAKGYISKQDLDTLRNTAAQYEAAVAADAANV 181

Query: 155 RRAQAVLEQKRIKAPFDGVLGIRRVNLGQFVRAGDALVSLTDSRTLFANLTLPETALPVL 214
           R  Q  L   R+ +P D + GIR V+ G  V    A+V+LT    +    TLPE  L ++
Sbjct: 182 RDTQVQLNYTRVLSPIDSLAGIRAVDPGNVVTTSSAIVTLTQLHPINVMFTLPEQNLDMV 241

Query: 215 KR---NQQVALSV------DAYPGRVFQGRLSTIEPQIGSDTRTVRLQATIDNADGALTP 265
           +R       AL V      DA+P     G L  ++ QI + T T RL++   NA+  L P
Sbjct: 242 RRAAAKDGAALQVTALDRTDAHP-IADGGVLKVVDNQIDTSTGTFRLKSEFPNANNELWP 300

Query: 266 GMFVNGKVALPARPDAITVPETAITYSTHGDSVFVVRPAEKGDGFTAQQVFVKAGERQDG 325
           G FVN ++ +      + +P  A+     GD V+ V    + D     Q    AGE  D 
Sbjct: 301 GQFVNVRLLVNTVDGGLVIPAQAVQRGPDGDYVYQV----QADSTVKMQAVTVAGEVGDS 356

Query: 326 LVVIENGLAPGDKVVTSGQLRLYTGAAV 353
            V++ +GL  GD+VVT GQ RL  G+ V
Sbjct: 357 HVMVGSGLKAGDRVVTEGQFRLKPGSKV 384