Pairwise Alignments

Query, 369 a.a., Multidrug efflux system, membrane fusion component => MexH of MexHI-OpmD system from Variovorax sp. SCN45

Subject, 388 a.a., RND transporter MFP subunit from Pseudomonas simiae WCS417

 Score =  129 bits (323), Expect = 2e-34
 Identities = 113/366 (30%), Positives = 173/366 (47%), Gaps = 39/366 (10%)

Query: 16  LVLGGAGFGLAMKLRPAHAEGGGMPPAKVAVATAQKTQVARFLSGIGTLEANRQVEVPAE 75
           +VL  A + L    RPA ++        V V +  +  + RF+SGIG++ +   V +  +
Sbjct: 15  VVLAVAAWALT---RPAKSKLAAPTAIPVRVVSVAQQDIPRFVSGIGSVLSLHSVVIRPQ 71

Query: 76  VEGRVAKILFTPGGEVRAGQLLVQLNDAPEQGDMERLTAQRANAKALLE-------RTRR 128
           V+G + K+L   G  V+AG LL  ++D   +  +++  AQ   ++A L+       R + 
Sbjct: 72  VDGILTKLLVKEGQLVKAGDLLATIDDRSIRASLDQAKAQLGESQAQLQVALVNLKRYKA 131

Query: 129 LLPQQAATQEQLEQAQAAFDQ----ASGD---LRRAQAVLEQKRIKAPFDGVLGIRRVNL 181
           L      +++  +Q QA  +Q    A G+   +  AQ  L   +I++P  G +GIR V+ 
Sbjct: 132 LSVDDGVSKQTYDQQQALVNQLKATAQGNQAAIDSAQVQLSYTQIRSPVSGRVGIRTVDE 191

Query: 182 GQFVRAGDA--LVSLTDSRTLFANLTLPETALPVLKR--NQQVALSVDAYPGR------- 230
           G F+R  DA  L S+T    +    +LP+  LP L+         SVDAY G        
Sbjct: 192 GNFLRTSDAQGLFSVTQIDPIAVEFSLPQQMLPTLQGLIAAPTQASVDAYLGADTDGQTG 251

Query: 231 --VFQGRLSTIEPQIGSDTRTVRLQATIDNADGALTPGMFVNGKVALPARPDAITVPETA 288
             + +G LS I+ QI S T T+R +A  +NA   L PG  V  K+      +A+ VP T 
Sbjct: 252 DLLGEGHLSLIDNQISSTTGTLRAKAEFNNASQRLWPGQLVTIKIQTALDKNALVVPPTV 311

Query: 289 ITYSTHGDSVFVVR-PAEKGDGFTAQQVFVKAGERQDGLVVIENGLAPGDKVVTSGQLRL 347
           +      DS FV R   +K D    Q  +      QD  V I  G+  GD +V+ GQ RL
Sbjct: 312 VQRGL--DSHFVYRVNGDKVDVVPVQVTY------QDSDVNIIKGVQAGDVLVSDGQSRL 363

Query: 348 YTGAAV 353
             GA V
Sbjct: 364 KAGAQV 369