Pairwise Alignments

Query, 1026 a.a., Multidrug efflux system, inner membrane proton/drug antiporter (RND type) => MexI of MexHI-OpmD system from Variovorax sp. SCN45

Subject, 1027 a.a., Multidrug efflux RND transporter from Pseudomonas putida KT2440

 Score = 1319 bits (3413), Expect = 0.0
 Identities = 672/1021 (65%), Positives = 840/1021 (82%), Gaps = 1/1021 (0%)

Query: 1    MKFTDLFVRRPVLALVVSTLILLLGARALGDLPVRQYPLTESTTLTITTQYPGASPELMQ 60
            M+FTD+FVRRPVLALVVS+LI+L+G  A+G LP+RQYPL ES+T+TI+T+YPGAS ELMQ
Sbjct: 1    MRFTDVFVRRPVLALVVSSLIILMGLFAMGKLPIRQYPLLESSTITISTEYPGASAELMQ 60

Query: 61   GFVTQPIAQAVATIENVDYLSSSSTLGRSVISVRMKLNADANQALTQAMAQISQVKYRLP 120
            GFVTQPI QAV+++E +DYLSSSS  GRS+I++RM LN D+ QAL + MA+++QV+YRLP
Sbjct: 61   GFVTQPITQAVSSVEGIDYLSSSSQQGRSLITLRMVLNRDSTQALAETMAKVNQVRYRLP 120

Query: 121  AEAFDPVILKSSGEATAVAYVGFSSKTMPMPALTDYLSRVVQPQFASITGVSGVEVSGGQ 180
             +A+DPV+  S+G++TAVAYVGF+S ++ +P L+DYLSRVV+PQF+ I GV+ V+  GGQ
Sbjct: 121  EKAYDPVVELSAGDSTAVAYVGFASDSLSIPELSDYLSRVVEPQFSGIDGVAKVQSFGGQ 180

Query: 181  TLAMRVWLDPNRMAARGISAGELADALRQNNVQAAPGQVKGLYVVSNIRVNTDLVNVAEF 240
             LAMR+WLD  +MA RG++A ++A A+R NN QA PGQV+G YV+++I+V+TDL  V +F
Sbjct: 181  RLAMRLWLDSEQMAGRGVTAADVAQAVRANNYQATPGQVRGQYVLADIQVDTDLTRVEDF 240

Query: 241  RDMVVKRDGDAIVRLGDVATVELGAASADSSATMDGVPAIYLGLQAAPNGNPLVIVKRIR 300
            R+++++ DG  +VRL D+ TVEL AA+  +SATMDG PA++LGL   P+GNPLVIV+ IR
Sbjct: 241  RELIIRNDGTDLVRLRDIGTVELSAAATQTSATMDGKPAVHLGLFPTPSGNPLVIVEGIR 300

Query: 301  ELLPGIKQNLPPGVEVQLPFELARFIEASIDEVQKTLLEAIAIVVIVIFLCLGSVRAVLI 360
            +LLP I+Q LPPGV V L +E ARFI+ASI EV +TL+EA+ IVV+VI+LCLGS+R+VLI
Sbjct: 301  QLLPQIQQTLPPGVYVALAYETARFIDASIHEVLRTLVEAMLIVVLVIWLCLGSLRSVLI 360

Query: 361  PVVTIPLSMLGAAALMLLFGFSINLLTLLAMVLAIGLVVDDAIVVVENVHRHIEEGKSRV 420
             VV IPLSMLGAA LML+FGFS+NLLTLLAMVLAIGLVVDDAIVVVENVHRHIEEGKS +
Sbjct: 361  AVVAIPLSMLGAAGLMLMFGFSLNLLTLLAMVLAIGLVVDDAIVVVENVHRHIEEGKSPI 420

Query: 421  QAALIGAREVAGPVIAMTLTLAAVYAPIGLMGGLTGSLFKEFAFTLAGAVVVSGVIALTL 480
             AAL GARE+AGPVIAMTLTLAAVYAPIGLMGGLTG+LF+EFA TLAGAV+VSG++ALTL
Sbjct: 421  AAALAGAREIAGPVIAMTLTLAAVYAPIGLMGGLTGTLFREFALTLAGAVIVSGIVALTL 480

Query: 481  SPVMSSFLLPQDTTGSRMARAAEAFFHKLATGYGRLLDVSLHHRWVTGVFAALVLASLPF 540
            SPVMSS LL        MA  A+  F  L+  YGR+L  +L HRW++G  A LV  SLP+
Sbjct: 481  SPVMSSLLLQPGQQHGAMAAIADRLFGTLSGVYGRVLAYTLAHRWISGGVALLVCLSLPW 540

Query: 541  LYNSAQRELAPGEDQAMVLTAIKSPQHANIDYVEKFGKKWDEVFAALPENTGRWLINGSD 600
            LY   QRELAP EDQA VLTAIKSPQHA+++Y E+F  K D+V  ++ E T  W+ING+D
Sbjct: 541  LYLLPQRELAPPEDQAAVLTAIKSPQHASLEYAERFALKLDQVMKSIAETTDTWIINGTD 600

Query: 601  GVSNSIGGVQLSDWKDRKRNADQIQGDTQGRMNDVEGSSVFAFQLPSLPGSTGGLPVQMV 660
            G + S GG+ LS W+ R+R+A Q+Q   Q  + D+EGSS+FAFQ+ SLPGS+GGLPVQMV
Sbjct: 601  GPAASFGGINLSAWQARERSAAQVQAQLQQAVADIEGSSIFAFQVASLPGSSGGLPVQMV 660

Query: 661  IRSAADHRTVFEAMEALKKSARDSGKFIVVDSDLEFNNPTVEIRVDRAKANSLGVTMKSI 720
            +RSA D+  +F+ ME LK+ ARDSG F VVDSDL++NNP V++RVDRAKA SLG++M++I
Sbjct: 661  LRSAQDYPELFQTMEVLKQRARDSGLFAVVDSDLDYNNPVVKVRVDRAKAASLGISMQAI 720

Query: 721  GDTLAVLVGENYVNRFGMDGRSYDVIPQSPREQRLTAEALSRYFVKSASGQPVPLANLVQ 780
            G++L VLVGE Y+NRF + GRSYDVIPQS ++QRLT  ALSR +V++  G  VPLA LV+
Sbjct: 721  GESLGVLVGEQYLNRFALFGRSYDVIPQSIQDQRLTPAALSRQYVRAEDGSLVPLATLVR 780

Query: 781  LSTSVGPNKLTQFNQLNASTFQAIPAPGVTMGDAVAFLSEEAKKLPAGFSYDWQSDARQF 840
            L   V PN+L QF+Q NAST QAIPAPGV+MG+AVAFL +   +LP GFS+DWQS++RQ+
Sbjct: 781  LDIEVAPNRLLQFDQQNASTLQAIPAPGVSMGNAVAFLEQLTAELPPGFSHDWQSESRQY 840

Query: 841  TQEGSALVMAFVFAIVVIYLVLAAQYESLRDPLIILISVPMSICGALVPLALGFGTINIY 900
             QEG AL+ AF+ A+VVIYLVLAAQYESL DPLIIL++VP+SICGAL+PLALG+ T+NIY
Sbjct: 841  VQEGFALMWAFLAALVVIYLVLAAQYESLVDPLIILVTVPLSICGALLPLALGWATLNIY 900

Query: 901  TQIGLVTLIGLISKHGILMVEFANEIQMNKGLDRRASIEEAARIRLRPILMTTAAMVVGL 960
            TQIGLVTLIGLISKHGILMV FANEIQ+   LDR A+I  AA+IRLRP+LMTTAAM  G+
Sbjct: 901  TQIGLVTLIGLISKHGILMVAFANEIQVRDNLDRAAAIVRAAQIRLRPVLMTTAAMTFGV 960

Query: 961  VPLLFASGAGANSRFSIGLVIVVGMLVGTLFTLFVLPTMYTLLARDHR-AAGRSQRAAEL 1019
            +PLLFASGAGANSRF +G+VIV GMLVGTLFTLFVLPT+Y  LARDHR +  R+++  E 
Sbjct: 961  LPLLFASGAGANSRFGLGVVIVCGMLVGTLFTLFVLPTIYAWLARDHRVSTARARQLVEA 1020

Query: 1020 E 1020
            E
Sbjct: 1021 E 1021