Pairwise Alignments

Query, 1026 a.a., Multidrug efflux system, inner membrane proton/drug antiporter (RND type) => MexI of MexHI-OpmD system from Variovorax sp. SCN45

Subject, 1014 a.a., putative Multidrug efflux RND transporter from Pseudomonas putida KT2440

 Score = 1009 bits (2608), Expect = 0.0
 Identities = 512/1018 (50%), Positives = 726/1018 (71%), Gaps = 5/1018 (0%)

Query: 1    MKFTDLFVRRPVLALVVSTLILLLGARALGDLPVRQYPLTESTTLTITTQYPGASPELMQ 60
            M FTD F++RPVLA VVS LILLLG +A   L +RQYP  E+  +T+TT YPGA+ E +Q
Sbjct: 1    MAFTDTFIQRPVLASVVSLLILLLGFQAWNKLQIRQYPQMENALITVTTAYPGANAETIQ 60

Query: 61   GFVTQPIAQAVATIENVDYLSSSSTLGRSVISVRMKLNADANQALTQAMAQISQVKYRLP 120
            G++TQP+ Q++A+ E +DY++S S    S+IS+  ++ AD+++  T+ +A+ ++V+ +LP
Sbjct: 61   GYITQPLQQSLASAEGIDYMTSVSRQNFSIISIYARIGADSDRLFTELLAKANEVRNKLP 120

Query: 121  AEAFDPVILKSSGEATAVAYVGFSSKTMPMPALTDYLSRVVQPQFASITGVSGVEVSGGQ 180
             ++ DPV+ K + +A+A+ YV F SK M  P +TDYLSRV+QP+ A++ G++  E+ G Q
Sbjct: 121  QDSEDPVLSKEAADASALMYVSFYSKEMSNPQITDYLSRVIQPKLATLPGMAEAEILGNQ 180

Query: 181  TLAMRVWLDPNRMAARGISAGELADALRQNNVQAAPGQVKGLYVVSNIRVNTDLVNVAEF 240
              AMR+WLDP ++A  G+SA ++ +A+R+ N  +A G+VKG YVV+++  +T+L +   F
Sbjct: 181  VFAMRLWLDPVKLAGFGLSATDVTNAVRRYNFLSAAGEVKGEYVVTSVNASTELKSAEAF 240

Query: 241  RDMVVKRDGDAIVRLGDVATVELGAASADSSATMDGVPAIYLGLQAAPNGNPLVIVKRIR 300
              + +K  GD+ V LGDVA VE+GA + D+ ++ DG P++Y+G++A P  NPL ++K +R
Sbjct: 241  AALPLKTSGDSRVLLGDVARVEMGAENYDTVSSFDGTPSVYIGIKATPAANPLDVIKEVR 300

Query: 301  ELLPGIKQNLPPGVEVQLPFELARFIEASIDEVQKTLLEAIAIVVIVIFLCLGSVRAVLI 360
             ++P ++  LP  + V + ++  RFI+ASIDEV KTL EA+ IV++V+FL LG++R+VLI
Sbjct: 301  RIMPELESQLPSALNVSIAYDATRFIQASIDEVIKTLGEAVLIVIVVVFLFLGALRSVLI 360

Query: 361  PVVTIPLSMLGAAALMLLFGFSINLLTLLAMVLAIGLVVDDAIVVVENVHRHIEEGKSRV 420
            PVVTIPLSM+G    M + G+S+NLLTLLAMVLAIGLVVDDAIVVVEN+HRH+EEGKS  
Sbjct: 361  PVVTIPLSMIGVLFFMQMMGYSLNLLTLLAMVLAIGLVVDDAIVVVENIHRHMEEGKSPF 420

Query: 421  QAALIGAREVAGPVIAMTLTLAAVYAPIGLMGGLTGSLFKEFAFTLAGAVVVSGVIALTL 480
             AAL GARE+A PV++MT+TLAAVYAPIG + GLTG+LFKEFA TLAGAV++SG++ALTL
Sbjct: 421  DAALEGAREIAMPVVSMTITLAAVYAPIGFLTGLTGALFKEFALTLAGAVIISGIVALTL 480

Query: 481  SPVMSSFLLPQDTTGSRMARAAEAFFHKLATGYGRLLDVSLHHRWVTGVFAALVLASLPF 540
            SP+M + LL ++   S +A   +  F +L   Y RLL  +L  R V  VFA ++L  +P 
Sbjct: 481  SPMMCALLLRREQNPSGLAHRLDQLFERLKGRYQRLLHATLDSRPVVLVFAVIILCLIPV 540

Query: 541  LYNSAQRELAPGEDQAMVLTAIKSPQHANIDYVEKFGKKWDEVFAALPENTGRWLINGSD 600
            L    Q ELAP EDQ ++     SPQ AN+DY+  +  ++  +F A PE    + ING +
Sbjct: 541  LLKFTQNELAPNEDQGVIFMMSSSPQPANLDYLNAYTDQFTPLFKAFPEYYSSFQINGFN 600

Query: 601  GVSNSIGGVQLSDWKDRKRNADQIQGDTQGRMNDVEGSSVFAFQLPSLPGSTGGLPVQMV 660
            GV   IGG  L  W +R+R   ++    Q ++ ++ G  +F F LPSLPG+  GLP Q V
Sbjct: 601  GVQTGIGGFLLKPWNERERTQMELLPLVQAKLEEISGLQIFGFNLPSLPGTGEGLPFQFV 660

Query: 661  IRSAADHRTVFEAMEALKKSARDSGKFIVVDSDLEFNNPTVEIRVDRAKANSLGVTMKSI 720
            I +A D+  + +  + +K  A++SGKF  +D DL F+ P V + +DRAKA  +GV+M ++
Sbjct: 661  INTAGDYPALLDVAQRIKTRAQESGKFAFLDIDLAFDKPEVVVDIDRAKAAQMGVSMDTL 720

Query: 721  GDTLAVLVGENYVNRFGMDGRSYDVIPQSPREQRLTAEALSRYFVKSASGQPVPLANLVQ 780
            G TLA L+GE  +NRF ++GRSY VI Q  R  R     L+ Y+VK+  GQ +PL+ L+ 
Sbjct: 721  GGTLATLLGEAEINRFTLEGRSYKVIAQVERPYRDNPGWLNNYYVKNDQGQLLPLSTLIT 780

Query: 781  LSTSVGPNKLTQFNQLNASTFQAIPAPGVTMGDAVAFLSEEAK-KLPAGFSYDWQSDARQ 839
            L+    P +L QF QLNA+  Q +P   V++G+A+  + + A+ + P GF++D+   ARQ
Sbjct: 781  LTDRARPRQLNQFQQLNAAIIQGVPM--VSLGEALKTVQDIAREEAPEGFAFDYAGAARQ 838

Query: 840  FTQEGSALVMAFVFAIVVIYLVLAAQYESLRDPLIILISVPMSICGALVPLALGFGTINI 899
            + QEGSAL + F  A+ +I+LVLAAQ+ES RDPL+IL++VP+SICGAL+PL LG  ++NI
Sbjct: 839  YVQEGSALWVTFGLALAIIFLVLAAQFESFRDPLVILVTVPLSICGALLPLFLGVSSMNI 898

Query: 900  YTQIGLVTLIGLISKHGILMVEFANEIQMNKGLDRRASIEEAARIRLRPILMTTAAMVVG 959
            YTQ+GLVTLIGLISKHGIL+VEFAN+++  +GL  R +IEEAA IRLRP+LMTTAAMV G
Sbjct: 899  YTQVGLVTLIGLISKHGILIVEFANQLRDERGLSVREAIEEAAAIRLRPVLMTTAAMVFG 958

Query: 960  LVPLLFASGAGANSRFSIGLVIVVGMLVGTLFTLFVLPTMYTLLARDHRAAGRSQRAA 1017
            +VPL+ ASGAGA SRF IG+VI  GM +GTLFTLFVLP +YTLLA  H+A+ ++   A
Sbjct: 959  MVPLILASGAGAVSRFDIGMVIATGMSIGTLFTLFVLPCIYTLLA--HKASAKAPAIA 1014