Pairwise Alignments

Query, 477 a.a., Multidrug efflux system, outer membrane factor lipoprotein => OpmD of MexHI-OpmD system from Variovorax sp. SCN45

Subject, 468 a.a., Outer membrane protein OprJ from Pseudomonas putida KT2440

 Score =  192 bits (488), Expect = 2e-53
 Identities = 150/459 (32%), Positives = 222/459 (48%), Gaps = 18/459 (3%)

Query: 16  LVLAGCAVGPKYTAPSDAPVAISAPERSLFAGDAVQR-DWWRQLDDPQLDALIDRALAEN 74
           L LAGC++ P Y  P +APVA    + +   G +V++ DW   + DP L  L+  AL  N
Sbjct: 15  LTLAGCSLTPTYQRP-EAPVAAEWGDAAGHTGHSVEQLDWQAFIVDPVLRQLVGTALDNN 73

Query: 75  HEIRIAQARLLEARATQTEAELDRLPVVTASASKTRG---IAQGNDGLQPDVRSLSQSSR 131
             +R     + +ARA       DR+P + ASAS  R     A  +DG +     +S + +
Sbjct: 74  RSLRQTLLDIEQARAQYRIQRADRVPGLNASASGNRQHLPAALSSDGRE----GVSSTYQ 129

Query: 132 AGFDA-SWEIDLFGRLKRLDEAATARAEASAADLEQVRIVAVAELARNYYEMRGAEQRIA 190
            G     +E+DLFGR+K L +AA  +  A+       RI  +AE+++ Y  + GAE+R A
Sbjct: 130 VGLSLPEYEVDLFGRVKSLSDAALEQYLATEEVGRAARIALIAEVSQAYLALDGAERRQA 189

Query: 191 VTRRTLDSLRQSLRVTEAQVRTGRGLEGDLASAQANLATTESQLPALETARRQSAYRVAV 250
           +TR+TL S   SL +   +   G     D   A   +  + ++L      +RQ+   + +
Sbjct: 190 LTRQTLASREDSLALVGQRRAAGTATALDHQEALGLVEQSRAELEVTVRQQRQAYNALVL 249

Query: 251 LAG-LRPAELEPMLRPQPLRVLDKRLPIGDMADLLRRRPDVLRAERGLAASTADVGAVTA 309
           L G    A+  P  RP    VL+  +P G  + L+ RRPD+L AE  L A  AD+GA  A
Sbjct: 250 LLGSAEAAKAMPAERPDEPMVLNDIVP-GAPSALIERRPDILAAEHRLRARNADIGAARA 308

Query: 310 ELYPRFDIGGFLGFIALRGSDLGSSSSRAFSVTPGVSWPALRLGSVKARVRGAEARAQGD 369
             +PR  + G  G  + + S L    SR+++  P +S P    G  +A +  AEAR    
Sbjct: 309 AFFPRISLTGSFGTASAQMSGLFDGGSRSWAFMPQLSLPLFDAGRNRAGLSLAEARKDSA 368

Query: 370 RALYE---QTVLRAIEDVEGALTGYGQNQLRLQRLVEASARSGRAAELAEVRYREGAAPY 426
            A YE   Q   R + D   A     + Q   + L + S  +     LA+ RY  G   +
Sbjct: 369 VAAYEGAIQVAFREVADALAATDTLRREQAARRALADTSRET---LTLAKARYEGGVDNH 425

Query: 427 LSVLDAQRTLLRAQDAVAEAETASYTSLVALYKALGGGW 465
           L  LDAQR     + A  EA T    +LV L++ALGGGW
Sbjct: 426 LRYLDAQRNSYVNEAAFIEASTQRQLALVNLFRALGGGW 464