Pairwise Alignments

Query, 477 a.a., Multidrug efflux system, outer membrane factor lipoprotein => OpmD of MexHI-OpmD system from Variovorax sp. SCN45

Subject, 484 a.a., putative Multidrug efflux MFS outer membrane protein from Pseudomonas putida KT2440

 Score =  241 bits (615), Expect = 4e-68
 Identities = 157/469 (33%), Positives = 242/469 (51%), Gaps = 12/469 (2%)

Query: 9   APFALSLLVLAGCAVGPKYTAPSDAPVAISAPERSLFAGDAVQRD-----WWRQLDDPQL 63
           +P  L++L L GC +GP +  P        AP +   A    Q +     WW    D +L
Sbjct: 8   SPLLLAVL-LTGCTLGPDFQRPDSQAPQQWAPLQGEAAASQPQAEPLELRWWETFHDARL 66

Query: 64  DALIDRALAENHEIRIAQARLLEARATQTEAELDRLPVVTASASKTRGIAQGNDGLQPDV 123
            ALI R    N ++++A ARLL++RA ++    D +P V  +A  +R      DGL    
Sbjct: 67  SALIQRVAERNLDLQMASARLLQSRALRSTLAADEVPSVDVNAGYSRA-RNSADGLSDPS 125

Query: 124 RSLSQSS----RAGFDASWEIDLFGRLKRLDEAATARAEASAADLEQVRIVAVAELARNY 179
               + +    +    A WE+DL+GR++R  EAA A  E +  D   V +  ++E A NY
Sbjct: 126 GKAGKEAFNLWQGDLVAGWELDLWGRVRRQVEAADATVEVAENDRRGVLLALLSETAGNY 185

Query: 180 YEMRGAEQRIAVTRRTLDSLRQSLRVTEAQVRTGRGLEGDLASAQANLATTESQLPALET 239
            ++R  +  + VT+  L   R SL++++ +   G     D+A A A +A+ ES+LP+LE 
Sbjct: 186 IQLRAVQHTLDVTQDNLRVARHSLKLSQDRQAEGVATRLDVAQASAQVASIESRLPSLEA 245

Query: 240 ARRQSAYRVAVLAGLRPAELEP-MLRPQPLRVLDKRLPIGDMADLLRRRPDVLRAERGLA 298
            R      +++LA   P  L+  +L+   L    ++  IG  ++L  RRPD+ +AE  L 
Sbjct: 246 QRDDLINALSLLAAEPPRSLQAELLQGGELPAPQQKFAIGLPSELAERRPDIRQAEARLH 305

Query: 299 ASTADVGAVTAELYPRFDIGGFLGFIALRGSDLGSSSSRAFSVTPGVSWPALRLGSVKAR 358
           A+TA +G   A+ YP   + G +GF AL+ SD G   SR F+  P +S P    G +K  
Sbjct: 306 AATASIGVAKADFYPSIRLSGSVGFQALQLSDFGGWDSRRFAFGPQMSLPIFEGGRLKGT 365

Query: 359 VRGAEARAQGDRALYEQTVLRAIEDVEGALTGYGQNQLRLQRLVEASARSGRAAELAEVR 418
           +   EA+ Q     Y + VL A  +++  L  Y  +QLR   L EA  ++  A E A+ +
Sbjct: 366 LELREAQQQEAALNYRKVVLGAWHEIDDVLRLYNASQLRRDHLAEAVRQNRIALETAQRQ 425

Query: 419 YREGAAPYLSVLDAQRTLLRAQDAVAEAETASYTSLVALYKALGGGWQA 467
           Y EGA  +L+VL  Q  LL +++   ++  A   +LV LYKALGGGWQA
Sbjct: 426 YVEGAVDFLNVLTVQGALLASEEQWIDSSAAVSQALVGLYKALGGGWQA 474