Pairwise Alignments

Query, 498 a.a., Putative amidase R03093 from Variovorax sp. SCN45

Subject, 483 a.a., Glutamyl-tRNA(Gln) amidotransferase subunit A from Pseudomonas putida KT2440

 Score =  172 bits (436), Expect = 2e-47
 Identities = 156/485 (32%), Positives = 218/485 (44%), Gaps = 65/485 (13%)

Query: 43  MGMSSIAELSRRLAAGSVSSSQLVEEALAAIQNPAGEGARAFIRVHADSARAAAGRLDAD 102
           M   ++AE++R LA  S SS +L    LA I+    +   +FI V  D A   A   DA 
Sbjct: 1   MHQLTLAEIARGLADKSFSSEELTGALLARIKQLDPQ-INSFISVTEDLALGQARAADAR 59

Query: 103 RKAGRPAASQISGIPISLKDLFDEAGITTLGGSTVLAGQPPAARDAIVVERLRRAGAIII 162
           R AG  +A  + G PI+ KDLF   G+ T  GS +L     A  DA VV +L  AG + +
Sbjct: 60  RAAGETSA--LLGAPIAHKDLFCTNGVRTSCGSKMLDNFK-APYDATVVAKLAEAGMVTL 116

Query: 163 GRSNTVEFAYTGLGINPHYGTPKNVFDRATGRIPGGSTSGGAISVADGMAAGAIGTDTGG 222
           G++N  EFA      + HYG  KN ++     +PGGS+ G A +VA  +     GTDTGG
Sbjct: 117 GKTNMDEFAMGSANESSHYGAVKNPWNLE--HVPGGSSGGSAAAVAARLLPATTGTDTGG 174

Query: 223 SLRIPSALNGLVGFKPTQRRIPLDGVLPLSTSFDSAGPIAWTVEDCALLDAVMAG----- 277
           S+R P+AL  L G KPT  R+   G++  ++S D  GP+A T EDCALL   MAG     
Sbjct: 175 SIRQPAALTNLTGLKPTYGRVSRWGMIAYASSLDQGGPLARTAEDCALLLQGMAGFDAKD 234

Query: 278 ----ELPRP----IRVPPLRGLRFAVPKTFFQDDLSPAVASAFAAALSKLSAAGATVTEL 329
               E P P         L+GLR  +PK +F   L P +A    A++ +L   GA V E+
Sbjct: 235 STSIEEPVPDYSASLNASLQGLRIGLPKEYFGAGLDPRIADLVQASVKELEKLGAVVKEI 294

Query: 330 PMAEFAKAPTINPRGMITAAEAFTWHREF--IKTGAAKYDPR-----------------V 370
            +     A  I    +I  AEA +    F  ++ G    +P+                 V
Sbjct: 295 SLPNMQHA--IPAYYVIAPAEASSNLSRFDGVRFGYRCEEPKDLTDLYKRSRGEGFGVEV 352

Query: 371 LARIKTGETITAPD-----YLQLQALRRQFIRSINTAAASYDAMLMPTTPDTA------- 418
             RI  G    +       Y++ Q +RR        A    D +L PTTP+ A       
Sbjct: 353 QRRIMVGTYALSAGYYDAYYVKAQQIRRLIKNDFMAAFNDVDLILGPTTPNPAWKLGAKS 412

Query: 419 -PPIAEVLKDDDTYYRINGRMLRNPSVVNLFDGCALSVPCHEAGSAPIGLMVAGIGNTDH 477
             P+A  L+D    Y I   +   P          LS+P       P+G+ +      + 
Sbjct: 413 SDPVAAYLED---VYTITANLAGLP---------GLSMPAGFVDGLPVGVQLLAPYFQEG 460

Query: 478 RLLAV 482
           RLL V
Sbjct: 461 RLLNV 465