Pairwise Alignments

Query, 465 a.a., Exodeoxyribonuclease VII large subunit (EC 3.1.11.6) from Variovorax sp. SCN45

Subject, 459 a.a., exodeoxyribonuclease from Pseudomonas simiae WCS417

 Score =  270 bits (689), Expect = 1e-76
 Identities = 163/425 (38%), Positives = 238/425 (56%), Gaps = 25/425 (5%)

Query: 56  LDARFNPVTVRGEISGFSRASSGHCYFALKDESGQLRCAMFRRAAGLLDFSPRDGDQVEV 115
           L+  F  + V GEIS  +R +SGH YF LKD   Q+RCA+FR  A  +  + +DG  V+V
Sbjct: 29  LEDVFTNIWVEGEISNLARPASGHVYFTLKDSGAQVRCALFRNNAARVRQALKDGLAVKV 88

Query: 116 RGRLAVYEPRGDLQLVVESLRRAGQGALFEQFMQRKARLEAEGLFDPARKRALPTMPRAV 175
           RG+++++E RGD QL+++++  AG GAL   F   K +L AEGLF   RK  LP  PR +
Sbjct: 89  RGKVSLFEGRGDYQLILDTVEPAGDGALRLAFDALKEKLSAEGLFSAERKVPLPAHPRRI 148

Query: 176 GVVTSLGAAALHDVVTALRRRVPHIPVVLAPAAVQGANAPGELVRALHSLYALEPAVDVI 235
           G+++S   A + D+++  RRR P+I + L P AVQG  A  ++VRAL    A     D +
Sbjct: 149 GIISSPTGAVIRDIISVFRRRAPNIELTLIPTAVQGREAIPQIVRALK--LADARGFDAL 206

Query: 236 LLVRGGGSIEDLWAFNDEALARTIVQSPVPVISGVGHETDFTIADFCADLRAPTPTAAAE 295
           +L RGGGS+EDLW FN+EA+AR +     P++S VGHETD +I+DF AD+RAPTP+AAAE
Sbjct: 207 ILARGGGSLEDLWCFNEEAVARAVDACVTPIVSAVGHETDVSISDFVADVRAPTPSAAAE 266

Query: 296 LVSAPRDLWLGALDLLDERLSDSLGGRLDVLGQRLDQAAGRLGRPSNLVTRQQLRLAHHA 355
           L++      +  ++ L  RL   +  RL     RL+  A RL  P   + +Q  RL    
Sbjct: 267 LLAPDASHLVRQVENLHRRLVMLMRNRLSHDRLRLEGMARRLRHPGERLRQQAQRLDDLD 326

Query: 356 QRLQYA----MRSKRERLAQAPRAMAADFPSKLERAVTQRHDRL-ERVALRWR------- 403
            RL+ A    + ++RERL +    +A   P +    + QR D L ER+    R       
Sbjct: 327 MRLRRAFERSLNTRRERLIRLETRLAGQHPGRQLALLRQRLDSLAERLPRAMREGLKSRR 386

Query: 404 -----------LLDPALVLQRGYAWLTDADGRAVVSAKQLAPGDAVVARLADGEVDMTVS 452
                      ++ P   L RGY+ L D  G+A+ +A Q   G  + ARL +G++ + V 
Sbjct: 387 LQLQSQMQTLHVVSPLATLGRGYSILLDERGQAIRNAAQTHTGQRLTARLGEGQLQVRVE 446

Query: 453 PGGVT 457
              +T
Sbjct: 447 DNHLT 451