Pairwise Alignments

Query, 465 a.a., Exodeoxyribonuclease VII large subunit (EC 3.1.11.6) from Variovorax sp. SCN45

Subject, 459 a.a., Exodeoxyribonuclease 7 large subunit from Pseudomonas putida KT2440

 Score =  275 bits (704), Expect = 2e-78
 Identities = 166/425 (39%), Positives = 239/425 (56%), Gaps = 25/425 (5%)

Query: 56  LDARFNPVTVRGEISGFSRASSGHCYFALKDESGQLRCAMFRRAAGLLDFSPRDGDQVEV 115
           L+  F  V V GEIS  +R +SGH YF LKD   Q+RCA+FR+ A  +  + RDG  V V
Sbjct: 29  LEDVFRSVWVEGEISNLARPASGHMYFTLKDSGAQVRCALFRQNATRVRQALRDGLAVRV 88

Query: 116 RGRLAVYEPRGDLQLVVESLRRAGQGALFEQFMQRKARLEAEGLFDPARKRALPTMPRAV 175
           RG+++++E RGD QL+++++  AG GAL   F   K +L AEGLF   RK+ LP  P+ +
Sbjct: 89  RGKVSLFEGRGDYQLILDTVEPAGDGALRLAFEALKEKLGAEGLFSAERKKPLPAHPQRI 148

Query: 176 GVVTSLGAAALHDVVTALRRRVPHIPVVLAPAAVQGANAPGELVRALHSLYALEPAVDVI 235
           G++TS   A + D+++   RR P + + L P AVQG  A  ++VRA+    +L    D +
Sbjct: 149 GIITSPTGAVIRDIISVFGRRAPQVELNLIPTAVQGREAIAQIVRAIRLADSL--GFDAL 206

Query: 236 LLVRGGGSIEDLWAFNDEALARTIVQSPVPVISGVGHETDFTIADFCADLRAPTPTAAAE 295
           +L RGGGS+EDLW FN+EA+AR +     P++S VGHETD +I+DF AD+RAPTP+AAAE
Sbjct: 207 ILARGGGSLEDLWCFNEEAVARAVAACVTPIVSAVGHETDVSISDFVADVRAPTPSAAAE 266

Query: 296 LVSAPRDLWLGALDLLDERLSDSLGGRLDVLGQRLDQAAGRLGRPSNLVTRQQLRLAHHA 355
           L++         LD L  RL   +  RL     RL+    RL  P   + ++  RL    
Sbjct: 267 LLAPDNSGLRQRLDGLQRRLLLRMQNRLTHDRLRLESLTRRLRHPGERLRQRAQRLDDLD 326

Query: 356 QRLQYA----MRSKRERLAQAPRAMAADFPSKLERAVTQRHDRL-ERVALRWR------- 403
            RL+ A    +  +RERLA+    +AA  P +  + + QR D L ER+    R       
Sbjct: 327 MRLRRAFMLNLNQRRERLARLDARLAAQHPGRNLKLLNQRLDSLAERLPRAMREVLKDRR 386

Query: 404 -----------LLDPALVLQRGYAWLTDADGRAVVSAKQLAPGDAVVARLADGEVDMTVS 452
                      ++ P   L RGY+ L D  G+A+ SA+Q   G  + ARL +GE+ + V 
Sbjct: 387 QRFQAQLQTLQVVSPLATLARGYSILLDEQGQAIRSAEQTRNGQRLTARLNEGELLVRVE 446

Query: 453 PGGVT 457
              +T
Sbjct: 447 DNHLT 451