Pairwise Alignments

Query, 286 a.a., ABC transporter, permease protein 1 (cluster 4, leucine/isoleucine/valine/benzoate) from Variovorax sp. SCN45

Subject, 495 a.a., putative Urea ABC transporter from Pseudomonas putida KT2440

 Score =  144 bits (362), Expect = 5e-39
 Identities = 102/292 (34%), Positives = 145/292 (49%), Gaps = 17/292 (5%)

Query: 6   FDGVAYGMLLFLIGVGLSITMGLMNFVNLAHGSFAMVGGY---VAAVLMNHFGLGFG--- 59
           F G++ G +L L  +GL+IT GL+  +N+AHG   M+G Y   +  VL+  F  G     
Sbjct: 204 FSGLSLGSVLLLAALGLAITFGLLGVINMAHGEMLMLGAYSTYMVQVLLQRFAPGAIEFY 263

Query: 60  --LSLAAAFVAAALVGAVLEFVFYRRLYRAHPLDQVLLSIGVVFVSIAAFTYFFGPTMQP 117
             ++L  AF  +A VG  LE    R LY   PL+ +L + G+  + I A    FG     
Sbjct: 264 PLIALPVAFAVSAGVGMALERTVIRHLY-GRPLETLLATWGISLILIQAIRLLFGAQNVE 322

Query: 118 FTLPAALDGQVSLLGMEVGRY-RLFLIACGAAVLVALLLGLGKTRYGAMVRAAVDNQRVA 176
            + PA L G + LL   V  Y RL +I    AV++   L L +TR G  VRA   N+ +A
Sbjct: 323 VSNPAWLSGGIQLLPNLVLPYNRLVIIGFALAVVLLTWLLLNRTRLGLNVRAVTQNRNMA 382

Query: 177 GGTGIHVQRLFFLTFSLGCGLAGLGGALSLGMLGLEPSFPLKYLVYFLMVVCVGGAGTVT 236
              G+   R+  L F LG G+AGLGG     +  + P     Y++   +VV +GG G + 
Sbjct: 383 ACCGVSTGRVDMLAFGLGSGIAGLGGVALSQVGNVGPDLGQSYIIDSFLVVVLGGVGQLA 442

Query: 237 GPFIAALLVGIVDVAGKYYLPEAGA----FLIYVFMIVMLLVRPNGIVAKKG 284
           G   AA  +GI   A K   P+ GA     LI   +I+ +  RP G+ A KG
Sbjct: 443 GSLWAAFGLGI---ANKLLEPQIGAVLGKILILALIILFIQKRPQGLFALKG 491