Pairwise Alignments

Query, 286 a.a., ABC transporter, permease protein 1 (cluster 4, leucine/isoleucine/valine/benzoate) from Variovorax sp. SCN45

Subject, 286 a.a., Branched-chain amino acid ABC transporter, permease protein from Pseudomonas putida KT2440

 Score =  165 bits (417), Expect = 1e-45
 Identities = 99/278 (35%), Positives = 150/278 (53%), Gaps = 1/278 (0%)

Query: 5   IFDGVAYGMLLFLIGVGLSITMGLMNFVNLAHGSFAMVGGYVAAVLMNHFGLGFGLSLAA 64
           + +G+  GM+ FLI VGL+I  GL+NFVN AHG+F ++G Y+    +   G  +   L A
Sbjct: 9   LLNGLGLGMIYFLIAVGLTIIFGLLNFVNFAHGAFFLLGAYLCYTAVAVTGNFWLALLIA 68

Query: 65  AFVAAALVGAVLEFVFYRRLYRAHPLDQVLLSIGVVFVSIAAFTYFFGPTMQPFTLPAAL 124
             V AAL  AV E +  +R+Y      Q+L+++G+  +   A    +GP  +   +P  L
Sbjct: 69  PLVVAALAWAV-ERLLIKRIYHLPHTFQILVTLGIALIIQEASVLIWGPVGKNIAVPPEL 127

Query: 125 DGQVSLLGMEVGRYRLFLIACGAAVLVALLLGLGKTRYGAMVRAAVDNQRVAGGTGIHVQ 184
            G + L       YRLFLI   A + + L L L +TR+GA+VRA  ++       G ++ 
Sbjct: 128 RGVLILGDFIYPYYRLFLIGFAALIGIGLWLLLERTRFGALVRAGSESTETVSLLGTNIF 187

Query: 185 RLFFLTFSLGCGLAGLGGALSLGMLGLEPSFPLKYLVYFLMVVCVGGAGTVTGPFIAALL 244
           RLF LTF+LG GLAG+ G L   + G +P    + L    +VV +GG G+  G  +  LL
Sbjct: 188 RLFSLTFALGVGLAGVAGVLFAPLRGAQPFVGPEILGIAFVVVVIGGMGSFGGALVGGLL 247

Query: 245 VGIVDVAGKYYLPEAGAFLIYVFMIVMLLVRPNGIVAK 282
           VG+V        P+  + +IY  M  ++LVRP G+  +
Sbjct: 248 VGVVQSMMTSLWPQGASLMIYGAMAAVILVRPYGLFGR 285