Pairwise Alignments

Query, 320 a.a., ABC transporter, permease protein 2 (cluster 4, leucine/isoleucine/valine/benzoate) from Variovorax sp. SCN45

Subject, 355 a.a., amino acid ABC transporter permease from Pseudomonas simiae WCS417

 Score =  103 bits (257), Expect = 6e-27
 Identities = 82/322 (25%), Positives = 134/322 (41%), Gaps = 41/322 (12%)

Query: 24  SSFFLLPDKLTLMSQIMIFGLFAVSLDMALGYAGILTVGHAAFFGAGAYAAGL------- 76
           ++F +    LTL+ +I+ + + A++LD+  GYAG+L++GH  FF  G YA G+       
Sbjct: 42  NAFHISAYTLTLVGKILCYAIVALALDLVWGYAGMLSLGHGLFFALGGYAMGMYLMRQAS 101

Query: 77  -------LAKYGWSE-PFT---------GLLFALVVSGLLGYALSYLVVRGA------DL 113
                  +    W+E P+           +   ++  GLL     +   R         +
Sbjct: 102 GDELPAFMTFLSWTELPWYWVGTQHFVWAMCLVVLAPGLLALVFGFFAFRSRIKGVYFSI 161

Query: 114 TRLMITIGVCVLLFEVANRLSGITGGTDGLQGVVIAPVLGFFDFDLYGKTAFCYAFGVVL 173
               +T    +L F       G  G T+         +LGF      G  A  +   V L
Sbjct: 162 MTQALTFAGMLLFFRNETGFGGNNGFTN------FRSILGF-GITEPGTRAVLFVATVAL 214

Query: 174 ---AMFLLVRLVLRSPFGLALRGIHDSRKRMLAIGSPVEARLRMAYAFSAAVAGVAGALL 230
              ++F+  RL  RS FG  L  + D+  R++  G          +  SA + G+AGAL 
Sbjct: 215 LVASLFIGWRLA-RSKFGRVLTALRDAENRLMFCGYDPRGFKLFVWVLSAVLCGLAGALY 273

Query: 231 AQTTQFVGIESIGFNRSAEVLIILVLGGTGRLYGGMIGAIVYMLVHDWFADMNPQYWMFW 290
                 +    +    S E  + + LGG G L G ++GA V   +  WF    P+YW+F+
Sbjct: 274 VPQVGIINPSEMSPTNSIEAAVWVALGGRGTLIGPLLGAGVVNGMKSWFTVAFPEYWLFF 333

Query: 291 LGIFLIAAVMLGRGGIMGALSR 312
           LG   I   +    G++G L +
Sbjct: 334 LGALFIIVTLYLPKGVIGLLKK 355