Pairwise Alignments

Query, 320 a.a., ABC transporter, permease protein 2 (cluster 4, leucine/isoleucine/valine/benzoate) from Variovorax sp. SCN45

Subject, 359 a.a., putative Urea ABC transporter, permease protein from Pseudomonas putida KT2440

 Score =  107 bits (268), Expect = 3e-28
 Identities = 81/312 (25%), Positives = 129/312 (41%), Gaps = 39/312 (12%)

Query: 33  LTLMSQIMIFGLFAVSLDMALGYAGILTVGHAAFFGAGAYAAGL--------------LA 78
           LTL+ +I+ + + A++LD+  GYAG+L++GH  FF  G YA G+              + 
Sbjct: 51  LTLVGKILCYAIVALALDLVWGYAGLLSLGHGLFFALGGYAMGMYLMRQAAGDGLPGFMT 110

Query: 79  KYGWSE-PFT---------GLLFALVVSGLLGYALSYLVVRGA------DLTRLMITIGV 122
              W+E P+           L   ++  GLL     +   R         +    +T   
Sbjct: 111 FLSWTELPWYWAGTQHFAWALCLVVLAPGLLALVFGWFAFRSRIKGVYFSIMTQALTFAG 170

Query: 123 CVLLFEVANRLSGITGGTDGLQGVVIAPVLGFFDFDLYGKTA--FCYAFGVVLAMFLLVR 180
            +L F       G  G T          +LGF D    G  A  F     ++LA   L  
Sbjct: 171 MLLFFRNETGFGGNNGFTS------FRTILGF-DIAAQGTRAVLFLLTVALLLASLYLCW 223

Query: 181 LVLRSPFGLALRGIHDSRKRMLAIGSPVEARLRMAYAFSAAVAGVAGALLAQTTQFVGIE 240
            + RS FG  L  + D+  RM+  G        + +  SA + G+AGAL       +   
Sbjct: 224 RLTRSKFGRLLTAVRDAENRMMFCGYDPRGFKLLVWVLSAVLCGLAGALYVPQVGIINPS 283

Query: 241 SIGFNRSAEVLIILVLGGTGRLYGGMIGAIVYMLVHDWFADMNPQYWMFWLGIFLIAAVM 300
            +    S E  + + LGG G L G ++GA +   +  WF    P++W+F+LG   I   +
Sbjct: 284 EMSPTNSIEAAVWVALGGRGTLIGPLLGAGLVNGMKSWFTVAFPEFWLFFLGALFILVTL 343

Query: 301 LGRGGIMGALSR 312
               G++G L +
Sbjct: 344 YLPKGVVGLLKK 355