Pairwise Alignments

Query, 320 a.a., ABC transporter, permease protein 2 (cluster 4, leucine/isoleucine/valine/benzoate) from Variovorax sp. SCN45

Subject, 339 a.a., Branched-chain amino acid ABC transporter, permease protein from Pseudomonas putida KT2440

 Score =  153 bits (386), Expect = 6e-42
 Identities = 103/310 (33%), Positives = 158/310 (50%), Gaps = 8/310 (2%)

Query: 8   PAQLRAAEAVFWIALAS--SFFLLPDKLTLMSQIMIFGLFAVSLDMALGYAGILTVGHAA 65
           P     A A+  + +AS  +  LL    TL ++I+IF + A++ ++ LGY G+L+ G   
Sbjct: 8   PVAKGRAPALLSLVVASLVALPLLLPSATLATEILIFAMAALACNLLLGYTGLLSFGQGI 67

Query: 66  FFGAGAYAAGLLAKYGWSEPFTGLLFALVVSGLLGYALSYLVVRGADLTRLMITIGVCVL 125
           FFG GAY A LL  +     F  LL A V    L   +  L +R   +  +M+T+    +
Sbjct: 68  FFGVGAYGAALLMIHLQWGMFAALLGAAVFGAFLALLVGALAIRRTGIYFVMLTLAFSQM 127

Query: 126 LFEVANRLSGITGGTDGLQGVVIA--PVLGFFDFDLYGKTAFCYAFGVVLAMFLLVRL-- 181
            + +A  LSG TGG +GL  V      + G    DL     F Y F  VL + +      
Sbjct: 128 AYFLAYTLSGWTGGDNGLLDVPRPNIEIAGHVLVDLADPRHF-YVFVAVLFLLIFAAALR 186

Query: 182 VLRSPFGLALRGIHDSRKRMLAIGSPVEARLRMAYAFSAAVAGVAGALLAQTTQFVGIES 241
           V+RSPFG  L  I ++  R  AIG        + +  S A+ G+AGAL A    F  + +
Sbjct: 187 VIRSPFGSTLLAIRENETRAAAIGYDTRHFKILVFMLSGAITGIAGALYAMLLHFAPLSN 246

Query: 242 IGFNRSAEVLIILVLGGTGRLYGGMIGAIVYMLVHDWFADMNPQYWMFWLGIFLIAAVML 301
           I    S  +LI+ ++GGTG L+G ++GA   +L+ D  +++ P+ W+  LG+ LI  V+ 
Sbjct: 247 IDLMMSENILIMTIVGGTGSLFGSLLGAGAIVLLGDVLSELWPR-WLMLLGVILILVVVF 305

Query: 302 GRGGIMGALS 311
            RGG+ G L+
Sbjct: 306 MRGGLWGGLT 315