Pairwise Alignments

Query, 397 a.a., Urea ABC transporter, substrate-binding protein UrtA from Variovorax sp. SCN45

Subject, 401 a.a., ABC transporter, substrate-binding protein (cluster 4, leucine/isoleucine/valine/benzoate) from Variovorax sp. SCN45

 Score =  111 bits (277), Expect = 4e-29
 Identities = 94/362 (25%), Positives = 164/362 (45%), Gaps = 23/362 (6%)

Query: 29  IASAQDGNTVKLGLLHSLSGTIAIAEASLVDAEKLAIEEINAAGGVMGKKIEAVVEDGAS 88
           +  A     +K+G ++S     A  E      E LA++EINA GG+ GKKIE +  D  +
Sbjct: 20  LVPAHAQGVIKIGEINSYKAQPAFLEPYKKGME-LAVDEINAKGGINGKKIELISRDDNA 78

Query: 89  ENPVFAEKARKLLERDKVAAIIGCYTSASRKALLPVLNQAKGLLFYPTYYEGQE--QDKR 146
                   A +L+ R+K+  + G + S +  AL     Q K       +Y   E   DK 
Sbjct: 79  NPGDAVRVAEELISREKIDVLAGAFLSNTGLALADFAKQKK------FFYLAAEPLTDKI 132

Query: 147 VFYPSQEAT--------QSVIAAVEWMAREKGKSFFLVGSDYIYPRTCNKIAKPAIAKAG 198
           V+    + T          V   V   A+ K K + +V  +Y Y ++     K  +  A 
Sbjct: 133 VWSNGNKYTYRLRPSTYMQVAMLVPEAAKLKKKRWAVVYPNYEYGQSSVATFKTLLKAAQ 192

Query: 199 GKV--LGEEYAPLGHTEFSSIINKIKAAKPDCIYSTVVGGSNVAFYKQLRAAGLDGAKQV 256
             V  + E+  PLG  +  S++  +  AKPD I++ + G     F ++    GL   ++V
Sbjct: 193 PDVEFVAEQAPPLGKVDSGSVVQALADAKPDAIFNVLFGADLSKFVREGNTRGLFKDREV 252

Query: 257 LLSTVVSENEIDGIGKDNAAGYYACMGY-FQSIKSPANEKFVKAFKAKYGQDRVIGDPME 315
            +S +  E E     KD A   +   GY +  +K+P ++ F+ A++AK+     +G    
Sbjct: 253 -VSVLTGEPEYLDPLKDEAPNGWIVTGYPWYGVKTPEHKAFLDAYQAKFKDYPRLGS--V 309

Query: 316 VAYNSVYLWKLAVEKAKSFDVDKVTAAAAGVEIEAPEGTVRIHATNHHVWKKVRVGRARP 375
           V Y++++     ++KA   D +K+ AA  G++++ P G +   A ++       VG+ + 
Sbjct: 310 VGYSAIHSIVAGIQKAGGTDTEKLVAAFKGLQVDTPFGKINYRAQDNQSTMGAYVGKTKN 369

Query: 376 DG 377
           DG
Sbjct: 370 DG 371