Pairwise Alignments

Query, 397 a.a., Urea ABC transporter, substrate-binding protein UrtA from Variovorax sp. SCN45

Subject, 421 a.a., putative Urea ABC transporter, periplasmic protein from Pseudomonas putida KT2440

 Score =  322 bits (825), Expect = 1e-92
 Identities = 182/405 (44%), Positives = 243/405 (60%), Gaps = 21/405 (5%)

Query: 7   RRQIVKTGGSMIVLGAAGGVAGIA-SAQDGNTVKLGLLHSLSGTIAIAEASLVDAEKLAI 65
           RR ++K     + L A+    G++ S Q   T+K+G+LHSLSGT+AI+E SL D   + I
Sbjct: 3   RRSLIKA----LTLSASIAAMGLSWSIQAAETIKVGILHSLSGTMAISETSLKDMALMTI 58

Query: 66  EEINAAGGVMGKKIEAVVEDGASENPVFAEKARKLLERDKVAAIIGCYTSASRKALLPVL 125
           E+INA GGV GK +E VV D AS  P+FAEK+R+LL +DKVA + GC+TS SRK++LPV 
Sbjct: 59  EQINAKGGVNGKMLEPVVVDPASNWPLFAEKSRQLLTQDKVAVVFGCWTSVSRKSVLPVF 118

Query: 126 NQAKGLLFYPTYYEGQEQDKRVFYPSQEATQSVIAAVEWMAREKG---KSFFLVGSDYIY 182
            +  GLLFYP  YEG+E    VFY      Q  I AVE++  E G   K FFL+G+DY+Y
Sbjct: 119 EELNGLLFYPVQYEGEEMSPNVFYTGAAPNQQAIPAVEYLMSEDGGSAKRFFLLGTDYVY 178

Query: 183 PRTCNKIAKPAIAKAG--GKVLGEEYAPLGHTEFSSIINKIK---AAKPDCIYSTVVGGS 237
           PRT NKI +  +   G   K + E Y P GH ++ +I+  IK   A     + STV G S
Sbjct: 179 PRTTNKILRAFLHSKGVADKDIEEVYTPFGHADYQTIVASIKKFSAGGKTAVISTVNGDS 238

Query: 238 NVAFYKQLRAAGLDGAKQVLLSTVVSENEIDGIGKDNAAGYYACMGYFQSIKSPANEKFV 297
           NV FYK+L   GL      +++  V E E+ GI      G+ A   YF+S+ +P N+KFV
Sbjct: 239 NVPFYKELANQGLKATDVPVVAFSVGEEELRGIDTKPLVGHLAAWNYFESVDNPVNQKFV 298

Query: 298 KAFKAKY------GQDR-VIGDPMEVAYNSVYLWKLAVEKAKSFDVDKVTAAAAGVEIEA 350
             +KA        G D+ V  DPME  Y  +++W  AVEKAKS DVDKV  A AG   EA
Sbjct: 299 ADWKAYAKAKGLPGADKAVTNDPMEATYVGIHMWAQAVEKAKSTDVDKVREALAGQSFEA 358

Query: 351 PEG-TVRIHATNHHVWKKVRVGRARPDGQFDIVWESPQLVEPNPF 394
           P G T+ +  TNHH+ K V +G  + DGQF +VWE+ Q +   P+
Sbjct: 359 PSGFTLTMDKTNHHLHKPVMIGEIQDDGQFSVVWETEQPLRAQPW 403