Pairwise Alignments

Query, 397 a.a., Urea ABC transporter, substrate-binding protein UrtA from Variovorax sp. SCN45

Subject, 400 a.a., Branched-chain amino acid ABC transporter, periplasmic amino acid-binding protein from Pseudomonas putida KT2440

 Score = 89.0 bits (219), Expect = 2e-22
 Identities = 90/378 (23%), Positives = 154/378 (40%), Gaps = 14/378 (3%)

Query: 7   RRQIVKTGGSMIVLGAAGGVA-GIASAQDGNTVKLGLLHSLSGTIAIAEASLVDAEKLAI 65
           RR ++K G   + LGA G +  G   A     +    L S+SG  A          +LAI
Sbjct: 3   RRTLLKAG---LALGALGSLPLGAHRAFADQPLTFYGLKSMSGAFASYGKYADMGSRLAI 59

Query: 66  EEINAAGGVMGKKIEAVVEDGASENPVFAEKARKLLERDKVAAIIGCYTSASRKALLPVL 125
            E      ++G  ++  V D          K ++ + +D      GC  S+S  A+   +
Sbjct: 60  AEHPQ---LLGHPLKYKVIDTEGNAGKAVRKVQEAIGQDGARFFQGCTLSSSALAVSKEI 116

Query: 126 NQAKGLLFYPTYYE---GQEQDKRVFYPSQEATQSVIAAVEWMARE--KGKSFFLVGSDY 180
           ++A G+   P   +   G++ +   F  S     ++   +  M+R+  + K ++ +   Y
Sbjct: 117 HKAGGVFMTPVGADEITGKDCNASTFRWSVPTYGAIRETLVPMSRQLPQAKRWYTITPQY 176

Query: 181 IYPRTCNKIAKPAIAKAGGKVLGEEYAPLGHTEFSSIINKIKAAKPDCIYSTVVGGSNVA 240
           ++       A+   A+ G + +G  Y  L   EFS  +    AAKPD +     G     
Sbjct: 177 VFGDALLDNARKVFAELGVEHIGNSYHSLQEQEFSGYLTNAIAAKPDVLVLLNFGSQASN 236

Query: 241 FYKQLRAAGLDGAKQVLLSTVVSENEIDGIGKDNAAGYYACMGYFQSIKSPANEKFVKAF 300
             +Q    G+    +VL+      ++   +G D   G Y    Y+  + +P N+  V A 
Sbjct: 237 ALRQAVNFGIKDRMKVLMVWSAGLDQFQELGSDVLEGVYLGAQYWHQVDTPLNKLLVAAT 296

Query: 301 KAKYGQDRVIGDPMEVAYNSVYLWKLAVEKAKSFDVDKVTAAAAGVEIEAPEGTVRIHAT 360
           +  YG +     P+   Y    +   A+ KA S D   V+AA  G+  + P G   I   
Sbjct: 297 RKAYGINP--NYPLAADYIGTKVMLEAIVKAGSLDGAAVSAALQGMRFQGPTGEELIRPG 354

Query: 361 NHHVWKKVRVGRARPDGQ 378
           +H V K   + R +P GQ
Sbjct: 355 DHQVLKDYYLLRGKPQGQ 372