Pairwise Alignments

Query, 300 a.a., Urea ABC transporter, permease protein UrtB from Variovorax sp. SCN45

Subject, 286 a.a., Branched-chain amino acid ABC transporter, permease protein from Pseudomonas putida KT2440

 Score =  144 bits (363), Expect = 2e-39
 Identities = 95/292 (32%), Positives = 149/292 (51%), Gaps = 12/292 (4%)

Query: 4   DIAVMQVFNGVSLFTILLLMAIGLAIVFGLMGVINMAHGELMALGAYMTYLAARFFEHFA 63
           D+ + Q+ NG+ L  I  L+A+GL I+FGL+  +N AHG    LGAY+ Y A     +F 
Sbjct: 3   DLYLFQLLNGLGLGMIYFLIAVGLTIIFGLLNFVNFAHGAFFLLGAYLCYTAVAVTGNF- 61

Query: 64  PGFMDLYLFAAIPFAFAVTFAFGYVLERGFIRFFYDRPLD-TLLATWGLSLMLQQAYRSI 122
                   + A+  A  V  A  + +ER  I+  Y  P    +L T G++L++Q+A   I
Sbjct: 62  --------WLALLIAPLVVAALAWAVERLLIKRIYHLPHTFQILVTLGIALIIQEASVLI 113

Query: 123 FGAQEVSVPLASWLAGAWEPTAGIQLPLNRIFIVGLTALVATGVYLLLYRTSWGLKVRAV 182
           +G    ++ +   L G          P  R+F++G  AL+  G++LLL RT +G  VRA 
Sbjct: 114 WGPVGKNIAVPPELRGVLI-LGDFIYPYYRLFLIGFAALIGIGLWLLLERTRFGALVRAG 172

Query: 183 TQNRAIAGAVGIDTHRVDAMTFALGSGLAGIAGAVFTMIGSTNPGTGQLYIVDSFIVVVF 242
           +++      +G +  R+ ++TFALG GLAG+AG +F  +    P  G   +  +F+VVV 
Sbjct: 173 SESTETVSLLGTNIFRLFSLTFALGVGLAGVAGVLFAPLRGAQPFVGPEILGIAFVVVVI 232

Query: 243 GGVQSLVGTALSGFSIAQSQTWLEYLMSGSMAKATILLLVIVVLYFRPNGLF 294
           GG+ S  G  + G  +   Q+ +  L     A   I   +  V+  RP GLF
Sbjct: 233 GGMGSFGGALVGGLLVGVVQSMMTSLWPQG-ASLMIYGAMAAVILVRPYGLF 283