Pairwise Alignments

Query, 351 a.a., Urea ABC transporter, permease protein UrtC from Variovorax sp. SCN45

Subject, 629 a.a., hypothetical protein from Xanthobacter sp. DMC5

 Score =  108 bits (271), Expect = 3e-28
 Identities = 99/339 (29%), Positives = 154/339 (45%), Gaps = 38/339 (11%)

Query: 2   GMKLSPQR---RSDLAGMAAVLLLLAVVLPATLDPFRLNLVSKYLAFAFVAVGVVLTWGY 58
           G+ + P R   + + AG+A V++ +A  LP  L  + L + ++ L +   A  +      
Sbjct: 297 GLTIRPWRPFTQMERAGVALVVVAVAA-LPFFLGNYALTVGAEILIYVLFAASLHFMMTV 355

Query: 59  GGVLSLGQGMFFGLGGYMMAMFLKLEASAPELPDFMVWSSVDQLPSWWIPFHSLGWTIVG 118
           GG+ S G   +FGLG Y  A  +K   +  E                          IVG
Sbjct: 356 GGLASFGHAAYFGLGAYGAAFLVKYMGAPMEAA-----------------------LIVG 392

Query: 119 ILVVPAVLAYVFSYAIFKRRVSGVYFAIVTLSLALTLTVVVIGQQGDTGGANGITDFRTL 178
            L+    LA    +  F  R+SGVYFA++TL+ A     +       TGG NG      L
Sbjct: 393 PLLG---LAGAVLFGWFCVRLSGVYFAMLTLAFAQIAWSIAFQWVDVTGGDNG------L 443

Query: 179 LGLDIAGDDAKRTMYFVEVLAIALV-MAVSLVIVRSRFGKILIAIRDREDRVRFSGYNTA 237
           LG+  A   ++   +F   L IA+V +AV  ++V S FG  L A+RD   R    G N  
Sbjct: 444 LGIWPASWASRPAGFFWLALGIAVVGVAVLRMLVFSPFGYGLRAVRDSALRSEAIGLNRQ 503

Query: 238 HMKAFVFAVAAVLSSIGGAFYSLQVGLIAPGVIGVVASVEMVIYAAVGGRLSIPGAVIGA 297
            M+   F VA   + + GA ++   G + P  + +  SV+ ++   +GG  ++ GAV+GA
Sbjct: 504 RMQWAAFIVAGTFAGLAGALFAFLKGSVFPDYMAIPTSVDGLVMVLLGGVETVSGAVVGA 563

Query: 298 LLIGFLKSYLSETFPEGWLYFLGAVFILVVWAMPDGLAG 336
           +L   L  +L        L  LG V +++V A P G+ G
Sbjct: 564 VLYKALAIWLMSQTDLSKL-VLGGVIVVIVLAFPKGVVG 601



 Score = 52.8 bits (125), Expect = 2e-11
 Identities = 65/295 (22%), Positives = 124/295 (42%), Gaps = 35/295 (11%)

Query: 48  VAVGVVLTWGYGGVLSLGQGMFFGLGGYMMAMFLKLEASAPELPDFMVWSSVDQLPSWWI 107
           VA G+ + +G   +++   G F+ LG Y+ A  L    + P             L  W  
Sbjct: 21  VASGLSIIFGVTRIVNFAHGAFYMLGAYV-AYTLTTRFAGP-------------LGFWG- 65

Query: 108 PFHSLGWTIVGILVVPAVLAYVFSYAIFKR--RVSGVYFAIVTLSLALT---LTVVVIGQ 162
                   IV   ++ A+L  +    + +R  +   ++  + T  + L    L VV+ G 
Sbjct: 66  -------AIVAAAIIVAILGALMEMVLLRRIYQAPELFQLLATFGVTLMVQDLVVVIWGP 118

Query: 163 QGDTGG-ANGITDFRTLLGLDIAGDDAKRTMYFVEVLAIALVMAVSLVIVRSRFGKILIA 221
           +   G  A G T   +L G  +   D      F+  L   ++  + L+  ++R+G ++ A
Sbjct: 119 EDLLGPRAPGFTGAISLFGRMVPTYDL-----FMMTLGPVVLGILWLLFHKTRWGVLVRA 173

Query: 222 IRDREDRVRFSGYNTAHMKAFVFAVAAVLSSIGGAFYSLQVGLIAPGVIGVVASVEMVIY 281
                + V   G N   +   VFA+   L+++GGA    +  +     + ++  VE+ + 
Sbjct: 174 ATQDREMVAALGVNQKWLFTGVFALGVFLAALGGALQIPRTTVTHAMDLSII--VEVFVV 231

Query: 282 AAVGGRLSIPGAVIGALLIGFLKSYLSETFPEGWLYFLGAVFILVVWAMPDGLAG 336
             +GG  S+ GA + A+++  L ++     P+  L  +  V  +V+   P GL G
Sbjct: 232 VVIGGLGSVFGAFVAAIIVAELNAFGILILPQISLITVFLVMAVVLVVRPWGLFG 286