Pairwise Alignments

Query, 384 a.a., Possible regulatory protein similar to urea ABC transporter, substrate binding protein from Variovorax sp. SCN45

Subject, 406 a.a., Leucine-, isoleucine-, valine-, threonine-, and alanine-binding protein from Xanthobacter sp. DMC5

 Score = 64.3 bits (155), Expect = 6e-15
 Identities = 73/312 (23%), Positives = 129/312 (41%), Gaps = 16/312 (5%)

Query: 5   DPIRVGILYSETGVTSTIGLSQLQGALLAIEEINAAGGVEGREIVAVRYDPQSNPARYAQ 64
           DPI++G+    TG +S++G+S   G  LA++E+N AGGV GR +  +  D ++      Q
Sbjct: 29  DPIKIGLTGPFTGGSSSMGVSMRDGVKLAVDEVNKAGGVLGRPLQLIERDDEAKNEVGVQ 88

Query: 65  LAEKLIVQDRVNVIFGCYMSSS---------RKAVIPVIEKWNKLLFYPTLYEGFEYSGN 115
           +A++LI ++ V    G Y+++          ++A IPVI            +   +   N
Sbjct: 89  IAQELINKEGVVATLG-YINTGVALASQRFYQEAEIPVINNVATGTLISKQFVPPDNKNN 147

Query: 116 VIY-TGAAPNQNSVQLAEFMTTNFGARVYLIGSDYIYPYESNRIMGELVMQRPGSEKLGE 174
            I+ T A     S  +A+      G +   I +D     +  R      +   G + + E
Sbjct: 148 YIFRTSANDAIQSAMIADEAVKRQGFKKPAILADSTNYGQLGRADLVKALATMGVKPVAE 207

Query: 175 RYVALDAGERDYRAIMDDIRDKRPDFIFSTVVGDSTASLYRAYAEAGFDPKTMPIASLTT 234
                + G+ D  A +   ++   D I +  +G   A +    A+ G+  K   I S T 
Sbjct: 208 E--KFNIGDTDMTAQLLRAKEAGADVILTYAIGPELAQIANGMAKLGW--KVPMIGSWTL 263

Query: 235 SEAEISQMGHGVATGHFTAAPYFQSIDSAANRRCLAMLRARFGDGCVPNLCWEA-SYFQM 293
           S A           G      + Q  D+   +  +   +A +    +P+    A  Y  +
Sbjct: 264 SMANFIDTAGANGNGAMMPQTFIQLPDTPKRKAFIEAYQAAYKIDRMPSPVSAAQGYDSV 323

Query: 294 HIFANAYRQAGS 305
            + A A +QAGS
Sbjct: 324 LLLAAAIKQAGS 335