Pairwise Alignments

Query, 384 a.a., Possible regulatory protein similar to urea ABC transporter, substrate binding protein from Variovorax sp. SCN45

Subject, 386 a.a., Leucine-, isoleucine-, valine-, threonine-, and alanine-binding protein from Xanthobacter sp. DMC5

 Score = 72.0 bits (175), Expect = 3e-17
 Identities = 65/254 (25%), Positives = 109/254 (42%), Gaps = 11/254 (4%)

Query: 5   DPIRVGILYSETGVTSTIGLSQLQGALLAIEEINAAGGVEGREIVAVRYDPQSNPARYAQ 64
           D I++G+    TG  +  G   + GA +A +EINA GG+ G+++  V  D +SNP   A 
Sbjct: 25  DTIKIGVNEPLTGAFAASGTYVVNGAKIAADEINAKGGILGKKVELVIEDNKSNPTEAAS 84

Query: 65  LAEKLIVQDRVNVIFGCYMSSSRKAVIPVIEKWNKLLFYPTLYEG-FEYSGN-VIYTGAA 122
           +AEKLI  D+V V+ G + SS   A +P +E+++  +   T   G    SGN  I+  + 
Sbjct: 85  VAEKLITSDKVPVLMGAWGSSLTLATMPKLEEYSVPMLVETSSSGKITTSGNPFIFRISP 144

Query: 123 PNQNSVQLAEFMTTNFGAR---VYLIGSDYIYPYESNRIMGELVMQRPGSEKLGERYVAL 179
           P+    +  E      G +     +I +D    +          M +    ++G     +
Sbjct: 145 PSSVEAEAFEPSVKKLGLKKVDFLVINND----WGRGAAADFSKMLKANGVEVG-LVETM 199

Query: 180 DAGERDYRAIMDDIRDKRPDFIFSTVVGDSTASLYRAYAEAGFDPKTMPIASLTTSEAEI 239
           D   +D  A +  ++    D I  T   D    L++  A  G   + +        +  I
Sbjct: 200 DQSAQDMSAQLAKLKASDADTIMVTSAVDQLTLLFKQMAALGLKKRIITTGGSQNPDQII 259

Query: 240 SQMGHGV-ATGHFT 252
           +Q G     T H T
Sbjct: 260 AQAGAAADGTMHLT 273