Pairwise Alignments

Query, 384 a.a., Possible regulatory protein similar to urea ABC transporter, substrate binding protein from Variovorax sp. SCN45

Subject, 421 a.a., putative Urea ABC transporter, periplasmic protein from Pseudomonas putida KT2440

 Score =  220 bits (561), Expect = 5e-62
 Identities = 131/376 (34%), Positives = 204/376 (54%), Gaps = 15/376 (3%)

Query: 5   DPIRVGILYSETGVTSTIGLSQLQGALLAIEEINAAGGVEGREIVAVRYDPQSNPARYAQ 64
           + I+VGIL+S +G  +    S    AL+ IE+INA GGV G+ +  V  DP SN   +A+
Sbjct: 29  ETIKVGILHSLSGTMAISETSLKDMALMTIEQINAKGGVNGKMLEPVVVDPASNWPLFAE 88

Query: 65  LAEKLIVQDRVNVIFGCYMSSSRKAVIPVIEKWNKLLFYPTLYEGFEYSGNVIYTGAAPN 124
            + +L+ QD+V V+FGC+ S SRK+V+PV E+ N LLFYP  YEG E S NV YTGAAPN
Sbjct: 89  KSRQLLTQDKVAVVFGCWTSVSRKSVLPVFEELNGLLFYPVQYEGEEMSPNVFYTGAAPN 148

Query: 125 QNSVQLAEFMTTNFGA---RVYLIGSDYIYPYESNRIMGELVMQRPGSEKLGERYVALDA 181
           Q ++   E++ +  G    R +L+G+DY+YP  +N+I+   +  +  ++K  E  V    
Sbjct: 149 QQAIPAVEYLMSEDGGSAKRFFLLGTDYVYPRTTNKILRAFLHSKGVADKDIEE-VYTPF 207

Query: 182 GERDYRAIMDDIRD---KRPDFIFSTVVGDSTASLYRAYAEAGFDPKTMPIASLTTSEAE 238
           G  DY+ I+  I+         + STV GDS    Y+  A  G     +P+ + +  E E
Sbjct: 208 GHADYQTIVASIKKFSAGGKTAVISTVNGDSNVPFYKELANQGLKATDVPVVAFSVGEEE 267

Query: 239 ISQMGHGVATGHFTAAPYFQSIDSAANRRCLAMLRARF-------GDGCVPNLCWEASYF 291
           +  +      GH  A  YF+S+D+  N++ +A  +A          D  V N   EA+Y 
Sbjct: 268 LRGIDTKPLVGHLAAWNYFESVDNPVNQKFVADWKAYAKAKGLPGADKAVTNDPMEATYV 327

Query: 292 QMHIFANAYRQAGSDGIAEILPYILGSEFDAPQGL-VKIDPTNHHTCLYPRIGRVDSHGQ 350
            +H++A A  +A S  + ++   + G  F+AP G  + +D TNHH      IG +   GQ
Sbjct: 328 GIHMWAQAVEKAKSTDVDKVREALAGQSFEAPSGFTLTMDKTNHHLHKPVMIGEIQDDGQ 387

Query: 351 FTIVRQATRAVYPDPY 366
           F++V +  + +   P+
Sbjct: 388 FSVVWETEQPLRAQPW 403