Pairwise Alignments

Query, 384 a.a., Possible regulatory protein similar to urea ABC transporter, substrate binding protein from Variovorax sp. SCN45

Subject, 371 a.a., branched-chain amino acids ABC transporter - periplasmic leucine binding subunit from Pseudomonas putida KT2440

 Score = 77.0 bits (188), Expect = 8e-19
 Identities = 76/333 (22%), Positives = 139/333 (41%), Gaps = 19/333 (5%)

Query: 5   DPIRVGILYSETGVTSTIGLSQLQGALLAIEEINAAGGVEGREIVAVRYDPQSNPARYAQ 64
           D I++GI   +TG  +  G  Q  GA  AI++INAAGGV+G+ + A  YD   +P +   
Sbjct: 24  DTIKIGIAGPKTGPVTQYGDMQFIGAKQAIKDINAAGGVDGKMLEAKEYDDACDPKQAVA 83

Query: 65  LAEKLIVQDRVNVIFGCYMSSSRKAVIPVIEKWNKLLFYPT------LYEGFEYSGNVIY 118
           +A K +V D V  + G   SSS +    + E    ++  P          G++    +  
Sbjct: 84  VANK-VVNDGVKFVVGHLCSSSTQPASDIYEDEGVIMITPAATSPEITARGYKL---IFR 139

Query: 119 TGAAPNQNSVQLAEFMTTNFGARVYLIGSDYIYPYESNRIMGELVMQRPGSEKLGERYVA 178
           T    +        ++  +   +V  +  D     E      +  ++  G++     +  
Sbjct: 140 TIGLDSAQGPAAGNYIADHVKPKVVAVLHDKQQYGEGIATAVKQTLESKGTKV--AVFEG 197

Query: 179 LDAGERDYRAIMDDIRDKRPDFIFSTVVGDSTASLYRAYAEAGFDPKTMPIASLTTSEAE 238
           L+AG++D+ +I+  ++    DF++          + R   E G   K M    +      
Sbjct: 198 LNAGDKDFSSIIQKLKQNNVDFVYYGGYHPELGLILRQAQEKGLKAKFMGPEGV--GNDS 255

Query: 239 ISQMGHGVATGHFTAAPYFQSIDS-AANRRCLAMLRARFGDGCVPNLCWEASYFQMHIFA 297
           ISQ+    + G     P  +S D+  AN++ +  ++A   D   P +    +Y  + + A
Sbjct: 256 ISQIAQNASEGLLVTLP--KSFDADPANKKIVDAIKADGKDPSGPFVF--PAYSAVELIA 311

Query: 298 NAYRQAGSDGIAEILPYILGSEFDAPQGLVKID 330
              ++AGSD   ++   I    F  P G +  D
Sbjct: 312 QGIKKAGSDDTDKVAEAIHKGTFKTPTGDLSFD 344