Pairwise Alignments

Query, 384 a.a., Possible regulatory protein similar to urea ABC transporter, substrate binding protein from Variovorax sp. SCN45

Subject, 373 a.a., ABC-type branched-chain amino acid transport systems, periplasmic component from Enterobacter asburiae PDN3

 Score = 65.1 bits (157), Expect = 3e-15
 Identities = 57/229 (24%), Positives = 93/229 (40%), Gaps = 19/229 (8%)

Query: 7   IRVGILYSETGVTSTIGLSQLQGALLAIEEINAAGGVEGREIVAVRYDPQSNPARYAQLA 66
           I +G+    TG  +T G     GA  A E+INAAGG+ G +I  V+ D    P +   +A
Sbjct: 28  IVIGVAGPFTGPNATYGDQYWHGATQAAEDINAAGGINGEKIKLVQGDDACEPKQAVAVA 87

Query: 67  EKLIVQDRVNVIFGCYMSSSRKAVIPVIE----------KWNKLLFYPTLYEGFEYSGNV 116
            +L+ QD+VN + G + SSS      V              N L+    + + F   G  
Sbjct: 88  NRLVDQDKVNAVVGHFCSSSTMPASEVYSDAGIIAITPGSTNPLITERGMSDMFRMCGR- 146

Query: 117 IYTGAAPNQNSVQLAEFMTTNFGARVYLIGSDYIYPYESNRIMGELVMQRPGSEKLGERY 176
                  +Q     ++F+     A+  +I  D     +      +  + + G + +   Y
Sbjct: 147 ------DDQQGQVASDFIIDKLKAKRVVIIHDKDTYGQGLADATKAALAKRGVQDV--MY 198

Query: 177 VALDAGERDYRAIMDDIRDKRPDFIFSTVVGDSTASLYRAYAEAGFDPK 225
             L  GE+D+ A++  I  ++PD +F          L R   E G   K
Sbjct: 199 EGLSRGEKDFNALVTKIGAQKPDVVFFGGCHPEAGPLVRQMREQGVQAK 247