Pairwise Alignments

Query, 152 a.a., predicted integral membrane protein from Variovorax sp. SCN45

Subject, 154 a.a., conserved membrane protein of unknown function from Pseudomonas putida KT2440

 Score =  103 bits (258), Expect = 9e-28
 Identities = 57/148 (38%), Positives = 86/148 (58%), Gaps = 1/148 (0%)

Query: 1   MSYVIALFIHLLCAAFWVGGMATMHFAVRPSAVATLEPPLRLRMMAATLRRFFVGVDASV 60
           +++ +   +H+L A  WVGGM      +RP+ VA LE P RLR+     RRFF  V  +V
Sbjct: 2   LAFALPYTLHVLAALVWVGGMFFAWLVLRPATVAALEGPARLRLWVEVFRRFFGWVWLAV 61

Query: 61  TLLFVSGVGMI-MAAGGFRGLHWRIEAMMSIAIVMAAIYVYIRASVFRALRRAVEESAWP 119
            +L +SG+GM+ M   GF      +  M+   I M A+++ I+A +   L+ AV+   WP
Sbjct: 62  AILAISGIGMLHMRFSGFETAPRYVHVMIGGGIAMFALFMRIQALLLPELKAAVQAEDWP 121

Query: 120 VAAARLNTVRKLVMLNLALGVAVFAVAT 147
             AA L  +R++V +NL LG+AV AVA+
Sbjct: 122 TGAAVLGRIRRMVGVNLLLGLAVVAVAS 149