Pairwise Alignments

Query, 300 a.a., Transcriptional regulator, LysR family from Variovorax sp. SCN45

Subject, 301 a.a., LysR family transcriptional regulator from Pseudomonas simiae WCS417

 Score =  140 bits (352), Expect = 5e-38
 Identities = 92/300 (30%), Positives = 151/300 (50%), Gaps = 9/300 (3%)

Query: 3   RKIPPLQTLVCFDAAARHESYTRAAQELALTQSAVSRQIGTLEAFLGVALFRRTRHGVAL 62
           R +PP  TL  F+ A RH ++T A++EL +TQSAVS Q+  LE   G+ LF+R +  + L
Sbjct: 2   RDLPPTATLRAFEVATRHATFTSASEELHVTQSAVSHQLKHLEDLWGLQLFQRGK-SLRL 60

Query: 63  TASGAAYARQTAKRLEAMERDTLDAMAHQGEGGSLSLAAVPTFATRWLMPRLKGFAALQP 122
           T +GAA A    +    +E    D    +G    L ++   +FA +WL+PRL G +   P
Sbjct: 61  TPAGAALAPIVREFFVNLETTLTDLREQKGR-VRLKVSTTYSFALKWLLPRLPGLSQQHP 119

Query: 123 DVVVHIETRTRPFLFADAEFDAALYAGTPAQVENWAGTHALLLMHEDVVPVCSPALLPR- 181
           ++++ +ET  +   F+ A+ D A+  G      ++   H+  ++ E + PV SP LL R 
Sbjct: 120 EILITLETSDKAINFSSADSDVAIRLGN----GHYPALHSEFMLREQIFPVASPDLLNRF 175

Query: 182 GKAVTPAAIAKMPLLQQ--STRPDGWRQWFDAQQIDAPNARGGPRYELFSILAAAASHGL 239
           G    PA + + PLL +  +     W  WF+   +     +   R+   ++   AA  G 
Sbjct: 176 GAPHEPAELLRYPLLMRDGADLVPKWEAWFEHVGVSVAALKESVRFADTNMTIEAALLGQ 235

Query: 240 GVALMPTMLVADELARGELVVACARPLSGERNYYLVTPERADQRPLLKFFSDWLLGQARQ 299
           G+AL  +  V  E+  G LV     P +    Y+ V P+  + +P +  F +WLL ++ Q
Sbjct: 236 GIALARSGHVEAEINDGSLVRLFDVPFASPVAYFFVCPKGIETQPHIVSFRNWLLAESTQ 295