Pairwise Alignments

Query, 300 a.a., Transcriptional regulator, LysR family from Variovorax sp. SCN45

Subject, 294 a.a., putative LysR-type transcriptional activator protein from Pseudomonas putida KT2440

 Score =  200 bits (508), Expect = 4e-56
 Identities = 117/295 (39%), Positives = 166/295 (56%), Gaps = 5/295 (1%)

Query: 2   RRKIPPLQTLVCFDAAARHESYTRAAQELALTQSAVSRQIGTLEAFLGVALFRRTRHGVA 61
           R   P +  L+ F+AAARHESYTRAA EL+LTQSAVSRQ+  LE  LG+ LFRR    V 
Sbjct: 4   RHLTPSMSLLLAFEAAARHESYTRAAAELSLTQSAVSRQVQALEQQLGLTLFRREGRQVQ 63

Query: 62  LTASGAAYARQTAKRLEAMERDTLDAMAHQGEGGSLSLAAVPTFATRWLMPRLKGFAALQ 121
           LT  G  Y R+ ++ L  +   TL A+A+Q   G+L LA +PTF ++WL+PRL  F +  
Sbjct: 64  LTDVGRLYQRELSEALGRIRSATLQALAYQSGVGTLRLATLPTFGSKWLLPRLHAFYSAH 123

Query: 122 PDVVVHIETRTRPFLFADAEFDAALYAGTPAQVENWAGTHALLLMHEDVVPVCSPALLPR 181
           P ++VHI +R     F  +E DAA+   +     +  G     L  E++V +  P     
Sbjct: 124 PGMLVHIHSRIETINFDTSEIDAAIGVAS----HDLPGLVCHRLHAEELVVILPPEAGVG 179

Query: 182 GKAVTPAAIAKMPLLQQSTRPDGWRQWFDAQQIDAPNARGGPRYELFSILAAAASHGLGV 241
            +  +PA I++  LL  +  P  W +WF    +     R GP +EL S L  A   G+G+
Sbjct: 180 SQGWSPARISEEVLLNVANNPHAWGEWFSHHGLPHRAMRLGPSFELTSHLIQAVRAGIGI 239

Query: 242 ALMPTMLVADELARGELVVACARPLSGERNYYLVTPERADQRPLLKFFSDWLLGQ 296
            L+P +LV +ELA+GEL  +     + +R+YYL+ P R +  P L+ F  WLL Q
Sbjct: 240 GLVPRILVEEELAKGEL-YSPGVAFASQRSYYLIYPPRNEALPSLRAFRGWLLEQ 293