Pairwise Alignments

Query, 300 a.a., Transcriptional regulator, LysR family from Variovorax sp. SCN45

Subject, 305 a.a., transcriptional activator of gcdH, LysR family from Pseudomonas putida KT2440

 Score =  311 bits (798), Expect = 9e-90
 Identities = 164/298 (55%), Positives = 205/298 (68%), Gaps = 5/298 (1%)

Query: 1   MRRKIPPLQTLVCFDAAARHESYTRAAQELALTQSAVSRQIGTLEAFLGVALFRRTRHGV 60
           MRRKIP    L+CF+AAAR+ES+T+AAQELALTQ AV RQIG LEAFL V LFRR+R GV
Sbjct: 1   MRRKIPSTAALICFEAAARNESFTKAAQELALTQGAVCRQIGGLEAFLNVELFRRSRRGV 60

Query: 61  ALTASGAAYARQTAKRLEAMERDTLDAMAHQGEGGSLSLAAVPTFATRWLMPRLKGFAAL 120
            LT +G +Y+RQ A +L+A+ERDTL  M  QG    + LA VPTF T+WL+PRLK F   
Sbjct: 61  RLTEAGLSYSRQVAAQLDAVERDTLSVMRQQG-ANVIELAVVPTFGTQWLLPRLKDFQQR 119

Query: 121 QPDVVVHIETRTRPFLFADAEFDAALYAGTPAQVENWAGTHALLLMHEDVVPVCSPALLP 180
            P+V V++  RTRPFLFAD  FDAA+Y G      +W+GT +  LM E+ VPVCSPALL 
Sbjct: 120 HPEVTVNLTNRTRPFLFADTTFDAAIYFGDA----DWSGTQSHQLMGENPVPVCSPALLN 175

Query: 181 RGKAVTPAAIAKMPLLQQSTRPDGWRQWFDAQQIDAPNARGGPRYELFSILAAAASHGLG 240
               +    IA++PLLQQSTRP  WRQWF +  ++      GPRYELFS+LA AA H +G
Sbjct: 176 GQGMLEARHIAQLPLLQQSTRPYAWRQWFGSVGMNVERDMTGPRYELFSMLAQAAMHDMG 235

Query: 241 VALMPTMLVADELARGELVVACARPLSGERNYYLVTPERADQRPLLKFFSDWLLGQAR 298
           +AL+P  L+  EL  G LVVA    LS ++ YYL+ PER  +   L+ F DWL+ QA+
Sbjct: 236 IALIPPFLIQRELEEGRLVVANRHALSSDKAYYLMIPERKVESASLRAFRDWLVSQAQ 293