Pairwise Alignments

Query, 319 a.a., ABC transporter, substrate-binding protein (cluster 10, nitrate/sulfonate/bicarbonate) from Variovorax sp. SCN45

Subject, 323 a.a., taurine ABC transporter periplasmic binding subunit from Pseudomonas putida KT2440

 Score = 57.4 bits (137), Expect = 5e-13
 Identities = 64/247 (25%), Positives = 103/247 (41%), Gaps = 17/247 (6%)

Query: 48  AFVAAEEG-YFKKRNLDVELKFIPLNSTIPAALQSDSLQIG--GPTPSVFLQAVDGGLDL 104
           A VA  +G Y K     ++ +     + +  A+ S  +QIG  G +P          ++ 
Sbjct: 38  AKVAQVDGDYEKASKASIDWRKFDNGADVITAVASGDVQIGYLGSSPLAAAATRKLPVET 97

Query: 105 VLVAGGGLTSKTITGFGLVARAGSGIKSAQDCVGKKIGVPGLGAFLHVTFRAWLKDSGVD 164
            L+A       T  G G    A   IKS QD +GKK+ VP +    H +  A LK   +D
Sbjct: 98  FLIA-------TQIGAGEALVARDSIKSPQDLIGKKVAVPFVSTG-HYSLLAALKSWNID 149

Query: 165 YRKVNFVEAAFPQHADLLRGGSVDAVVSADPFMSRITESGAGYVAS--YYSTFLPENNQT 222
             KV  +  A P      + G +DA    DP +    E+G   + S        P  +  
Sbjct: 150 PSKVQILNLAPPAIIAAWKRGDIDATYVWDPALGVAKENGKVLITSGELAQKGAPTFDAW 209

Query: 223 IVHAAKRDWVAKNPTAARAFREALVEA-AAFMQQPKNDAKVRAAIGKYIKLPPEVLAKVQ 281
           IV   ++D+  K+P   +AF +  ++A A + + PK     +  + K +KL     + + 
Sbjct: 210 IV---RKDFAEKHPDVVKAFAKVTLDAYADYRKDPKAWLADKGNVDKLVKLSGAKASDIP 266

Query: 282 VSPPGPV 288
           V   G V
Sbjct: 267 VLLEGNV 273