Pairwise Alignments

Query, 256 a.a., Alkanesulfonates transport system permease protein from Variovorax sp. SCN45

Subject, 273 a.a., Putative aliphatic sulfonates transport permease protein SsuC from Xanthobacter sp. DMC5

 Score =  114 bits (285), Expect = 2e-30
 Identities = 68/242 (28%), Positives = 122/242 (50%), Gaps = 6/242 (2%)

Query: 9   WARPWVVPLVLIGAFEWYARRASALGSDSLAPPSAAARAFVGAAMDGSLWQATGFTLGTA 68
           W  P V+P     A  W++  A       L P   A  + +     G L   +  +L   
Sbjct: 31  WVNPMVLPSPAAVAARWWSYLAP------LEPFDPATESKIAWIFSGELIHDSLASLSRV 84

Query: 69  ALGLLLGAVLGIALGLVLGLSRRAAQLGSMSIEVLRPVPSVALIPLAMLGFGFGVRMELA 128
            +G ++GA L + LGL +G S    +  +  ++VLRP+P +A IPL++L FG G    + 
Sbjct: 85  VMGFVVGAGLALPLGLFMGTSDSIYRYVNPLMQVLRPIPPIAYIPLSILWFGLGNAPAVF 144

Query: 129 IVAFATFWPLLVLVQAAVQQVEPRLLEVSRVLGLSARERAFKIVLPAIVPRLFVALRLGV 188
           ++A   F+P+L+   A V+ V+   +  +R LG S      +++LPA  P +    R+G+
Sbjct: 145 LIAIGAFFPVLMNTIAGVRHVDSIYIRAARSLGASRLTIFRRVILPAATPYILSGARIGI 204

Query: 189 AVALVVAVTVEIAANPNGMGYAMMIAQQSFDPALMLAWLGWIGVVGFAVNAGMLLLQRMV 248
             A +V +  E+ A  NG+G+ ++ A++ F    ++A +  IG++G A++  +  L   +
Sbjct: 205 GTAFIVVIVAEMIAVNNGLGFRILEAREYFWSDKIIAGMLTIGLIGLAIDLAVSRLNNHL 264

Query: 249 AR 250
            R
Sbjct: 265 LR 266