Pairwise Alignments

Query, 259 a.a., Alkanesulfonates transport system permease protein from Variovorax sp. SCN45

Subject, 256 a.a., Putative aliphatic sulfonates transport permease protein SsuC from Xanthobacter sp. DMC5

 Score =  139 bits (349), Expect = 8e-38
 Identities = 80/244 (32%), Positives = 133/244 (54%), Gaps = 12/244 (4%)

Query: 17  LALVALWWVASNAGWVSRVFLPTPQA---TFASLLEGLNLSGTGGNGELLGFTQATVGRM 73
           LAL+ LW  A+  G V   F P P +   TF +L+          +GEL     A++ R+
Sbjct: 19  LALLGLWEAAARMGLVDARFFPPPSSIVHTFGALV---------ASGELWTNLLASLRRL 69

Query: 74  IEGWLLASLFGVLLGAAIGVSPSVRAWVQPTLEFIRPLPASALLPLAISIFGLNPGMVLF 133
             G LL  +  + LG A+G+S  +RA + P +    P+P SA+LPL + IFGL     + 
Sbjct: 70  FLGMLLGGVPALFLGLAMGISKPLRAAIDPLISATYPIPKSAILPLVLLIFGLGEMSKVV 129

Query: 134 VVAFGAMWPVLLATVHGFAAVEPRLSEVARCLQMSRAAYIWKMGLPNAMPDILAGMRLAL 193
           +VA GA +P+L+ TV G A ++    +V    + SR      + LP A+P I+AG++LA+
Sbjct: 130 MVALGAFYPILINTVMGVANIDKIYLDVGHNYRASRWQVFRTIALPGALPSIMAGVKLAM 189

Query: 194 TIALIVAVVGEMIASQSGLGQAILLAARAFRASDLFAGIVLLGLIGFASNALLAFAEQRL 253
            + LI+  + EM+A+  G+G  I  A +      ++ G++++ L+GF  + +L   E+ L
Sbjct: 190 GMGLILIAISEMVAASDGIGYMIWNAWQVLTVDTMYVGLLVIALLGFVFSVILDEIERML 249

Query: 254 LRWQ 257
           + W+
Sbjct: 250 IPWK 253