Pairwise Alignments

Query, 335 a.a., hypothetical protein from Variovorax sp. SCN45

Subject, 648 a.a., Retron-type RNA-directed DNA polymerase (EC 2.7.7.49) from Variovorax sp. SCN45

 Score = 76.6 bits (187), Expect = 2e-18
 Identities = 66/233 (28%), Positives = 108/233 (46%), Gaps = 27/233 (11%)

Query: 55  LANRTDNYRSKKTMHANKERSLEVPKPALENVQRRIYQ-LLDRIEKPDYLHSGRKQRSYI 113
           +AN +   R      +  ER +  P P ++  Q  +   +L ++   D +H     RS +
Sbjct: 181 VANVSHYQRFTIAKKSGGERHISAPMPRMKRAQYWVLDNILAKMPVHDAVHGFLPGRSIL 240

Query: 114 TNAQVHAGAVWLIKLDIKKFYAAVSSARVYRFFQDVMRCSPDVASLLAKLCT-------- 165
           TNA  H G   +I LD+K F+ ++   RV   F+  +  S  VASLLA +CT        
Sbjct: 241 TNAAPHVGQDVVINLDLKDFFPSIGMRRVRGVFRQ-LGYSSQVASLLALVCTEAPTDEVQ 299

Query: 166 --------ARGH--LAIGSRVSQLLAFFSAKPMFDELHARALEYSIKDTYYVDDLTWSG- 214
                   ARG   L  G+  S +L     + +   L A A +   + T Y DDL++S  
Sbjct: 300 LDGRRYFVARGERVLPQGAPTSPMLTNLLCRRLDARLAASAAKLGFRYTRYADDLSFSAG 359

Query: 215 ---TRATAGFLWEVKKIVHRHGFEYH--RARLYAPNNPKLVTGVQIIGDRIAV 262
              +R TA  LW VK+IV   G   H  + ++   +  + VTG+ ++ D++++
Sbjct: 360 PAHSRDTAKLLWRVKQIVASEGLTVHPDKQQVMRRHRQQHVTGI-VVNDKLSL 411