Pairwise Alignments
Query, 773 a.a., ATP-dependent Clp protease ATP-binding subunit ClpA from Variovorax sp. SCN45
Subject, 873 a.a., Chaperone protein ClpB (ATP-dependent unfoldase) from Variovorax sp. SCN45
Score = 294 bits (752), Expect = 2e-83
Identities = 185/405 (45%), Positives = 248/405 (61%), Gaps = 30/405 (7%)
Query: 24 FITVEHLLLALL---DNPSAAEVLRACSANVDDLRASLTNFIKDNTPQVAGTDDVDTQPT 80
+I HLL A+L D P A +L NV L + IK PQV G D V P
Sbjct: 28 YIEPAHLLAAMLRQDDGPRA--LLERAGVNVPGLTQAAEAAIK-KLPQVQGHDIVQVGPE 84
Query: 81 LGFQRVIQRAIMHVQSTGNGKKEVTGANVLVAIFGEKDSHAVYYLHQQGVTRLDVVNFIA 140
LG +++Q ++ + + G L+A+ K + + G++R + I
Sbjct: 85 LG--KLLQAT--EKEAIKRNDQFIAGELFLLALADSK-ADIGKTAKENGLSRKSLEAAI- 138
Query: 141 HGIKKSDPPEAVKGAGEAPSNEGEEGGGERNEKASPLEQFTQNLNQLAKDGKIDPLIGRE 200
+AV+G G+ ++ EG E L+++ +L + A+ GK+DP+IGR+
Sbjct: 139 ---------DAVRG-GQGVNSADAEGQREA------LKKYCMDLTERARLGKLDPVIGRD 182
Query: 201 YEVERVIQILCRRRKNNPLLVGEAGVGKTAIAEGLAWRITQGDVPEILAESNVFSLDMGA 260
E+ R IQ+L RR KNNP+L+GE GVGKTAI EGLA RI G+VP+ L V SLDM A
Sbjct: 183 EEIRRAIQVLQRRTKNNPVLIGEPGVGKTAIVEGLAQRIVAGEVPDSLKGKRVLSLDMAA 242
Query: 261 LLAGTKYRGDFEQRLKGVLKSL-KDKPNAILFIDEIHTLIGAGAASGGTLDASNLLKPAL 319
LLAG K+RG+FE+RLK VL L KD+ I+FIDE+HT++GAG A G +DA N+LKPAL
Sbjct: 243 LLAGAKFRGEFEERLKTVLNELAKDEGQTIVFIDELHTMVGAGKAEGA-MDAGNMLKPAL 301
Query: 320 SSGQLKCIGATTFTEYRGIFEKDAALSRRFQKVDVVEPSVQETVDILKGLKSRFEEHHGV 379
+ G+L C+GATT EYR EKDAAL RRFQK+ V EPSV+ T+ IL+GL+ ++E HHGV
Sbjct: 302 ARGELHCVGATTLDEYRKYIEKDAALERRFQKIIVGEPSVEATIAILRGLQEKYEVHHGV 361
Query: 380 KYAVAALQAAAELSAKYINDRHLPDKAIDVIDEAGAAQRILPPSK 424
+ A+ AAAELS +YI DR LPDKAID+IDEA A +I SK
Sbjct: 362 QITDPAIVAAAELSDRYITDRFLPDKAIDLIDEAAAKIKIEMDSK 406
Score = 272 bits (696), Expect = 5e-77
Identities = 148/326 (45%), Positives = 207/326 (63%), Gaps = 4/326 (1%)
Query: 422 PSKRKKTISKTEVEEIVAKIARIPPANVSNDDRSKLQTIERDLKSVVFGQDKALEVLASA 481
P+ + + E+ E+VA+ IP A + +R KL +E L V GQD+A+ +A+A
Sbjct: 527 PTLLRTQVGSEEIAEVVARATGIPVAKLMQGERDKLLVMEDKLHERVVGQDEAIGAVANA 586
Query: 482 VKMARSGLGKGDKPIGSFLFSGPTGVGKTEAAKQLA-YIMGIE--LIRFDMSEYMERHAV 538
++ +RSGL ++P GSFLF GPTGVGKTE K LA ++ E LIR DMSE+ME+H+V
Sbjct: 587 IRRSRSGLSDPNRPTGSFLFLGPTGVGKTELCKALAGFLFDSEDHLIRIDMSEFMEKHSV 646
Query: 539 SRLIGAPPGYVGFDQGGLLTEAVTKKPHAVLLLDEIEKAHPDIFNVLLQVMDHGTLTDNN 598
+RLIGAPPGYVG+++GG LTEAV +KP++V+LLDE+EKAHPD+FNVLLQV+D G LTD
Sbjct: 647 ARLIGAPPGYVGYEEGGYLTEAVRRKPYSVVLLDEVEKAHPDVFNVLLQVLDDGRLTDGQ 706
Query: 599 GRKADFRNVIIIMTTNAGAETMNKATIGFTNPRQAGDEMGDIKRLFSPEFRNRLDAIVNF 658
GR DF+N +I+MT+N G+ + +A +G + ++K F PEF NR+D V F
Sbjct: 707 GRTVDFKNTVIVMTSNIGSPII-QAMVGKPSEEIKEAVWDELKNYFRPEFLNRIDETVVF 765
Query: 659 KALDENIILRVVDKFLLQLETQLSEKKVEVTFSDKLRKHLAKKGFDPLMGARPMQRLIQD 718
ALD I + L L+ +L++ + + S +AK GFDP+ GARP++R IQ
Sbjct: 766 HALDAKNIESIAAIQLKVLQARLAKMDLGLEVSPAALAEIAKVGFDPVFGARPLKRAIQQ 825
Query: 719 TIRRALADELLFGRLTDGGRLEVDLD 744
I L+ LL G +EV D
Sbjct: 826 RIENPLSKLLLDGSFGPKDTIEVTTD 851
Score = 26.6 bits (57), Expect = 0.006
Identities = 48/200 (24%), Positives = 81/200 (40%), Gaps = 24/200 (12%)
Query: 2 IAQELEVSLHMAFVEARQQRHEFITVEHLLLALLDNPSAAEVLRACSANVDDLRASLTNF 61
+ EL L EA ++ +FI E LLAL D S A++ + N R SL
Sbjct: 81 VGPELGKLLQATEKEAIKRNDQFIAGELFLLALAD--SKADIGKTAKEN-GLSRKSLEAA 137
Query: 62 IKDNTPQVAGTDDVDTQPTLGFQRVIQRAIMHVQSTGN-GKKE-VTGANV----LVAIFG 115
I V G V++ G + +++ M + GK + V G + + +
Sbjct: 138 I----DAVRGGQGVNSADAEGQREALKKYCMDLTERARLGKLDPVIGRDEEIRRAIQVLQ 193
Query: 116 EKDSHAVYYLHQQGVTRLDVVNFIAHGIKKSDPPEAVKG-----AGEAPSNEGEEGGGER 170
+ + + + GV + +V +A I + P+++KG A G + GE
Sbjct: 194 RRTKNNPVLIGEPGVGKTAIVEGLAQRIVAGEVPDSLKGKRVLSLDMAALLAGAKFRGEF 253
Query: 171 NEKASPLEQFTQNLNQLAKD 190
E+ + LN+LAKD
Sbjct: 254 EERLKTV------LNELAKD 267