Pairwise Alignments

Query, 344 a.a., Probable lipoprotein signal peptide from Variovorax sp. SCN45

Subject, 348 a.a., conserved exported protein of unknown function from Pseudomonas putida KT2440

 Score = 94.0 bits (232), Expect = 5e-24
 Identities = 86/303 (28%), Positives = 127/303 (41%), Gaps = 23/303 (7%)

Query: 41  FYPSGDPPQPTRRGRFTLDLAAQGAPVRGNGRLVVVSHGSGGAPWVHTDLAHSLVDAGFI 100
           FYP+    + +R   + +D+A +     G   L+V+SHG+ G+P     LA SL   GF+
Sbjct: 48  FYPAVGKTRISRIDGYPVDVAEEAPVAMGRFPLLVLSHGNTGSPLALHYLATSLARQGFV 107

Query: 101 VAMPEHKADNYKDDSNPGP-DSWTMRPGEVSRAIDAVGRDPRFAPLLKLDKVGMYGMSAG 159
           V    H  DN +D S  G   +   RP +VS AI A   D    P L   KVG+ G SAG
Sbjct: 108 VVAVVHPGDNVRDHSRLGTLSNLYGRPLQVSAAITAARDDAVVGPYLNDGKVGVIGYSAG 167

Query: 160 GHTALSLAGGLWSPAAFKQHCEADLVEDFQSCVGLITRLTGGPLDSIKKWGALLVIRHRF 219
           G TAL L+G        +Q+C  +   D  +C               K  G L+  R   
Sbjct: 168 GETALILSGARPDLERLRQYC-LERPHDADAC---------------KTHGILIADRSEL 211

Query: 220 GDATPREDHDPRIAAIVAGVPSAADFDMATLSHPRVALGLITARQDRWLIPRFHSDRVLA 279
              T     DPR+ A++   P +  F    L+  +V   + +   D+ L+    +   LA
Sbjct: 212 APET-----DPRVGAVMLMAPLSLLFGRHALAGVQVPALIYSGDSDQ-LVAVDRNAEALA 265

Query: 280 ACLPRCELIADMPTGGHGALLSPPPPGLTGLIGDMLNDPPGFDRAGVLPEVNRKTTAFFS 339
             LP       +   GH   ++         +  +  D  G DR  +   + R+T AFFS
Sbjct: 266 RKLPVTPDYRLLAGAGHFVFMAHCDAEQYARMPALCKDADGVDRRYIHHSLQRETAAFFS 325

Query: 340 AHL 342
             L
Sbjct: 326 QAL 328