Pairwise Alignments

Query, 344 a.a., Probable lipoprotein signal peptide from Variovorax sp. SCN45

Subject, 269 a.a., Probable lipoprotein signal peptide from Hydrogenophaga sp. GW460-11-11-14-LB1

 Score = 85.5 bits (210), Expect = 1e-21
 Identities = 85/289 (29%), Positives = 121/289 (41%), Gaps = 27/289 (9%)

Query: 58  LDLAAQGAPVRGNGR-LVVVSHGSGGAPWVHTDLAHSLVDAGFIVAMPEHKADNYKDDSN 116
           + +AA G PV+G    L+++SHG+GG+   H D A +L DAGF+VA   H  DNY D S 
Sbjct: 1   MSVAANG-PVQGQALPLILMSHGTGGSLLGHFDTAIALADAGFVVAAVTHTGDNYADQSR 59

Query: 117 PGPDSWTMRPGEVSRAIDAVGRDPRFAPLLKLDKVGMYGMSAGGHTALSLAGGLWSPAAF 176
                   RP +++R I+ +         +   +VGM+G SAGG T L+  G        
Sbjct: 60  SV--DIMDRPRQITRVINHMLSSWGGRAAIDPARVGMFGFSAGGFTTLANIGA------- 110

Query: 177 KQHCEADLVEDFQSCVGLITRLTGGPL--DSIKKWGALLVIRHRFGDATPREDHDPRIAA 234
                   V DF S +G + R   G      + K G  +        +T     D RI A
Sbjct: 111 --------VPDF-STIGPMCRQYPGDFACQLLAKSGNAVTPP---AASTLASAADARIKA 158

Query: 235 IVAGVPSAA-DFDMATLSHPRVALGLITARQDRWLIPRFHSDRVLAACLPRCELIADMPT 293
            V   P+    F    L + +V + L  A  D  ++P      V+   LP+      +  
Sbjct: 159 AVVAAPALGFTFAPEGLKNVKVPVQLWRAENDA-ILPHPRYAEVVRLGLPQAPDYRVVSN 217

Query: 294 GGHGALLSPPPPGLTGLIGDMLNDPPGFDRAGVLPEVNRKTTAFFSAHL 342
            GH   L+P    L  +  D+    PGFDR       N     FFS  L
Sbjct: 218 AGHFDFLAPCSSALASIAPDICTSAPGFDRVAFHASFNAAVVGFFSKAL 266